FMO13324.5prime Sequence
948 bp (948 high quality bases) assembled on 2013-02-11
> FMO13324.5prime
CAGTCGACATGCTTACCGACAGAGTTCTGGCCACCAAGGAGGCGCTAGTG
GTGGCTCTGGGCGACAACTGGGAGCGTTACCGGGCCAACATGAAGAATTG
GTTTCGGAGCCGTTGGACTAAGGAGGAATTCGATGCGGAGTCGCGGAAAA
TCCTAACACCTGACAAACTGCACCTGCACAATCAGTTCCTGCTCGCCCTG
CTCAACAAGATCGACGCCTTTGCTCCCCTGGAGAATCCTCCGGCCGTCCA
GACCAGCAGCAGTAGTGGCAACCGAAGCAAACGGCGCAAAAGAAGTTGCC
GCACCTTCGCCGAACGCCTTAATTTTGAGCTCAGCGACGTCCTGGACTTT
GTAGCCGAGGACAACATGCAAATCATTCGTCCGCCAACCACGATCGGTAT
TCCGTCGGACCAGCAACAGCAACAGCTTCAGTCGCAGCGGTACTGCGCGC
AGGAACTTTTCCTGCCCGACGCGGGATTCATTATGGGACGATTTCTGATC
GGTGCCTGGGAAATCGGACTTGTCTCCGTGGACGACAATGTCGCCGAGTA
CGTTGCCATGGCCGTGCAAGTTCTGCTCAAGGATCTACTATCGGCAATCA
TCAAGAAACGAAAGCACTACAAGACCAGCGGCGAAGGAAACTTTTACTAC
GATGTAGGTGCTCCGTTGCGTGATCCTTCGCTGCGCAACACCGTCACCCG
GCAGAAGGTCGACGACACGCCGCTGGAACTGGACAAGGAACTGAATACGG
CCAACTTTATGCGGCGACAGAACGACGATGTGACCTTCCTCTCCGCCTGC
GAAGAAGTCCAACCCACCGAACGCACAGTAATCACCCTCAAGGACTGCCA
ACTGGCCTTACGGGATCGCAACCTGATAGGCTCGCATGCCGTCTACTCCA
TAAACATGGACGACTCAATATGATGATGCATGCAGCTTTCTAGACCAT
FMO13324.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:30:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ada1-1-RB | 1068 | CG31865-RB | 71..994 | 9..931 | 4580 | 99.8 | Plus |
| Ada1-1-RA | 1093 | CG31865-RA | 96..1019 | 9..931 | 4580 | 99.8 | Plus |
| Ada1-2-RA | 1089 | CG31866-RA | 92..1015 | 9..931 | 4550 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:30:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11996904..11997703 | 9..808 | 3985 | 99.9 | Plus |
| 2L | 23513712 | 2L | 11992993..11993792 | 9..808 | 3970 | 99.8 | Plus |
| 2L | 23513712 | 2L | 11997768..11997891 | 809..931 | 570 | 99.2 | Plus |
| 2L | 23513712 | 2L | 11993857..11993980 | 809..931 | 555 | 98.4 | Plus |
Blast to na_te.dros performed 2014-11-28 18:30:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| accord | 7404 | accord ACCORD 7404bp | 6601..6633 | 146..178 | 111 | 81.8 | Plus |
FMO13324.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:55:31 Download gff for
FMO13324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ada1-1-RA | 94..1026 | 9..942 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:57:41 Download gff for
FMO13324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ada1-1-RA | 94..1026 | 9..942 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:01 Download gff for
FMO13324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ada1-1-RA | 96..1028 | 9..942 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:01 Download gff for
FMO13324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11996904..11997703 | 9..808 | 99 | -> | Plus |
| 2L | 11997768..11997900 | 809..942 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:57:41 Download gff for
FMO13324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11996904..11997703 | 9..808 | 99 | -> | Plus |
| arm_2L | 11997768..11997900 | 809..942 | 96 | | Plus |
