FMO13327.5prime Sequence
404 bp (404 high quality bases) assembled on 2013-02-11
> FMO13327.5prime
CAGTCGACATGGCCACCTTAAAGGCCCTCTTCATCTGCGCCTTTCTTACA
TGCATTGGTGTTACCTTCCTGATCCTGGCCTGCGCCGTGCCCACGACAAA
GATTTTCTATCCCTTCTTCGTTTTGCTGTTCTACGTGCTGTCAGTTCTTC
CAGTCTTCATTGCCAGGAGGACAACTCCTGGAAATGAGACCAATCCGAAA
TCGGAGTTTGCTCACTTCCTTACCGCGGGAATGGTGCTGAGTGCCTTCGC
CCTGCCCATCGTCCTAGCCCACGCATTGGTGATCACCTGGACGGCGAGTA
TCCTGACGATAATAAGTAACATTATTAACTACGGCACCATCTTCTGGTAC
GCCATGCGCGATGACGAGCCATACGGATCCATGTTCGCAAGCTTTCTAGA
CCAT
FMO13327.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:31:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30423-RE | 655 | CG30423-RE | 86..463 | 9..386 | 1890 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:31:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24875338..24875593 | 281..26 | 1280 | 100 | Minus |
2R | 25286936 | 2R | 24875168..24875273 | 386..281 | 530 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:31:34 has no hits.
FMO13327.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:55:47 Download gff for
FMO13327.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30423-RC | 57..434 | 9..386 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:39 Download gff for
FMO13327.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30423-RD | 86..463 | 9..386 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:49 Download gff for
FMO13327.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30423-RE | 86..463 | 9..386 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:49 Download gff for
FMO13327.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24875168..24875272 | 282..386 | 100 | <- | Minus |
2R | 24875338..24875593 | 25..281 | 99 | <- | Minus |
2R | 24875765..24875780 | 9..24 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:39 Download gff for
FMO13327.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20762691..20762795 | 282..386 | 100 | <- | Minus |
arm_2R | 20762861..20763116 | 25..281 | 99 | <- | Minus |
arm_2R | 20763288..20763303 | 9..24 | 100 | | Minus |