FMO13342.5prime Sequence
269 bp (269 high quality bases) assembled on 2013-02-11
> FMO13342.5prime
CAGTCGACATGAAAGCTATCATCGTTTTTATTCTGTTCATTTCAAGTGTG
CATGCTATGAGCAAATGCAACCAAGCAATTTATCTAAATCTTGATCCTCA
CTGCGGAATACTTCCCGATTGTAACTTAGATGGTCCAAATCCAAGTTACC
TCAAAAGGGTGTCGTGTGAACGCAAAGAAAACGGAAAACCAGGATTCATC
GAACTAATTCCCGGAAAATGTCTCCATGGTAAACCGCGTTGCTCGTTAAA
AGCAAGCTTTCTAGACCAT
FMO13342.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:32:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Acp63F-RB | 316 | CG10852-RB | 10..252 | 9..251 | 1215 | 100 | Plus |
Acp63F-RA | 401 | CG10852-RA | 10..252 | 9..251 | 1215 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:32:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 3816100..3816256 | 193..37 | 785 | 100 | Minus |
3L | 28110227 | 3L | 3815988..3816048 | 251..191 | 305 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:32:55 has no hits.
FMO13342.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:56:02 Download gff for
FMO13342.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acp63F-RA | 10..252 | 9..251 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:33 Download gff for
FMO13342.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acp63F-RA | 10..252 | 9..251 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:20:28 Download gff for
FMO13342.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acp63F-RA | 10..252 | 9..251 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:20:28 Download gff for
FMO13342.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3815988..3816046 | 193..251 | 100 | <- | Minus |
3L | 3816101..3816256 | 37..192 | 100 | <- | Minus |
3L | 3816318..3816345 | 9..36 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:33 Download gff for
FMO13342.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 3815988..3816046 | 193..251 | 100 | <- | Minus |
arm_3L | 3816101..3816256 | 37..192 | 100 | <- | Minus |
arm_3L | 3816318..3816345 | 9..36 | 100 | | Minus |