FMO13345.5prime Sequence
338 bp (338 high quality bases) assembled on 2013-02-11
> FMO13345.5prime
CAGTCGACATGCGGTACTATGAAGATCCATGTGGCTATCCTCCTCGCCAT
CACCATGGTCGTCCAAATATCGAAATTGATGTGGTTCCCGGTTGGGGTGG
CGGCTACTATCCGCCGCCGCCTCCGCCTCGGCCCGCCGAGGTAGTCTACA
TGACCCCGGCGGCTACCTATGTGCCCGGCACACAGGTGATAATGCCGCAA
CCCTACGGCGGCGTCACGGTGGCCACCACCAATGGATACTATCCGCAGCA
GCAGCAGCAGGCGTACGAGTATCAGTACCAGTATCAGCAGCCCTACAACA
ATCCACCGTATCCGCAGTGGGCAAGCTTTCTAGACCAT
FMO13345.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:33:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15422-RA | 687 | CG15422-RA | 73..384 | 9..320 | 1560 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:33:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4005056..4005367 | 9..320 | 1560 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 18:33:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2344..2419 | 241..316 | 145 | 68.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6809..6868 | 246..304 | 117 | 68.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6845..6897 | 246..300 | 117 | 73.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6807 | 246..316 | 110 | 64.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6794..6846 | 246..300 | 108 | 69.1 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1057..1124 | 223..291 | 108 | 63.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6755..6810 | 246..300 | 106 | 67.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6776..6831 | 246..300 | 106 | 67.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6785..6861 | 224..300 | 105 | 62.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6773..6829 | 246..301 | 102 | 66.7 | Plus |
FMO13345.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:56:05 Download gff for
FMO13345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15422-RA | 64..388 | 1..324 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:42 Download gff for
FMO13345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15422-RA | 64..388 | 1..324 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:20:37 Download gff for
FMO13345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15422-RA | 64..388 | 1..324 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:20:37 Download gff for
FMO13345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4005047..4005371 | 1..324 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:42 Download gff for
FMO13345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4005047..4005371 | 1..324 | 98 | | Plus |
