FMO13350.5prime Sequence
969 bp (969 high quality bases) assembled on 2013-02-11
> FMO13350.5prime
CAGTCGACATGGGACTCTCGAAGATCTGGCTTCTGGTGAGTTGTCTGCTG
TGGACCTGCCTGCCCCAGAGCCAGGGAACGGTGTATCCGAGGGACATCCT
TCTAAAGACTCCGAAATTTCGACGCGTCTGGGGCGGGGTGCAGTCCAACA
CAGGCCCGAATTTCGGAGGCTGGCTGTTGCGGATCCTGAACGGTGACGGT
AACTTTGCCTGCGGAGCTGCCTACTATGCCCCTCTGCTCGTGATCACCTC
GGCCAACTGCATCTATCCGTATCGGAACAGCCTTGAAGGTGCCACGGTGG
AGGGCACCGCGTTCTCCGAATGCGATAGGGAGAACTATGCTGATATCGAT
ACGATTCAATTTCCCGAGAAATTTATCTACCAGAAACTCTACATGGACGT
GGCAGTAGTGCGTCTAAGGGATCCCGTTAGGGGACGGCTCACTGAGTTCA
TCCGTCTTTGCAGCGTCAAAGTGCAGCCCAAAATGCAGATGGTGGTCTTC
GGATGGGGTTTCGACAATACGGAGGTGGAGATACCCTCATCGGATCCCCG
AAACGTTACAGTAACTATTATATCCATTAAGGAGTGCCGTCAAAAATTCA
AAAGCCCAAAGATAGCGAGCACATCGATCTGCGCCAGGCAGCCCAAGAAT
CCGAAGCAGTGCCTCTACGACGGAGGAAGCCCCCTGATTTACGGAAGAGA
GCTCTGCGGCGTCGTGTCCTTCGGGTCACACTGCATCGACACCTCTAGGC
CCGGCATGTACACCAACATCAGAAGAGTAAAACGATTCATTACTGAAACG
GAAGAATCCATAAATGCCGGTGATGTCTTCAGATCAACTAAAGTAGTGAA
AGAAACAAAGAAACCCCCAAAGAAAACAATCAAACCAAAATCGAAACCAG
TAAAGATACACCGTCTTTTAAGAACTGTAATGTGGAGCCCTTGGTTGTGT
GCAAGCTTTTCTAGACCAT
FMO13350.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:33:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34129-RA | 972 | CG34129-RA | 6..943 | 9..945 | 4650 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:33:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26190263..26191200 | 945..9 | 4625 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:33:44 has no hits.
FMO13350.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:56:11 Download gff for
FMO13350.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34129-RA | 1..947 | 7..953 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:06 Download gff for
FMO13350.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34129-RA | 1..951 | 7..954 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:20:57 Download gff for
FMO13350.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34129-RA | 1..951 | 7..954 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:20:57 Download gff for
FMO13350.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26190255..26191207 | 1..954 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:06 Download gff for
FMO13350.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22015977..22016929 | 1..954 | 99 | | Minus |
