FMO13351.5prime Sequence
413 bp (413 high quality bases) assembled on 2013-02-11
> FMO13351.5prime
CAGTCGACATGGACAGCAAGCAGCCTCCACCGTACAGTGAACAGTCCGGA
TACACTCCCGCACAAACCTATCAGCCCGGTGGCCCCACCCAGCCACCACT
GTACCCACCGATGCCGCAGCCACCGCAGTCCTCAACGGTGATCATCCAGA
CCACCACAACCTCCAACCTGGTGCCCATCGGCAGTGGACCCACCCGCATC
CGCTGTCCCTCCTGTCACGCCGAAGTACTGACCACCGTGAAGTCCACTCC
TTCCGGCAGGACGCACTGCTGGGCCCTCATCCTGTGCCTGTTCATCTGCT
GGCCGTGCGTATGCCTACCTTACTGCATGGACTCCTGCCAGAATGCCAAC
CACTACTGCCCCAACTGCAGCGCCTACATCGGCACCTACGAGAACGCAAG
CTTTCTAGACCAT
FMO13351.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:33:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42565-RB | 2577 | CG42565-RB | 89..475 | 9..395 | 1935 | 100 | Plus |
CG13511-RB | 2577 | CG13511-RB | 89..475 | 9..395 | 1935 | 100 | Plus |
CG13510-RC | 2577 | CG13510-RC | 89..475 | 9..395 | 1935 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:33:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 22657989..22658275 | 9..295 | 1435 | 100 | Plus |
2R | 25286936 | 2R | 22658923..22659022 | 296..395 | 500 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:33:50 has no hits.
FMO13351.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:56:12 Download gff for
FMO13351.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13510-RA | 85..481 | 9..407 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:11 Download gff for
FMO13351.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13510-RA | 89..485 | 9..407 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:21:02 Download gff for
FMO13351.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13510-RC | 89..485 | 9..407 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:21:02 Download gff for
FMO13351.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22657989..22658275 | 9..295 | 100 | -> | Plus |
2R | 22658923..22659032 | 296..407 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:11 Download gff for
FMO13351.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18545494..18545780 | 9..295 | 100 | -> | Plus |
arm_2R | 18546428..18546537 | 296..407 | 95 | | Plus |