Clone FMO13354 Report

Search the DGRC for FMO13354

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:133
Well:54
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14245-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO13354.5prime Sequence

335 bp (335 high quality bases) assembled on 2013-02-11

> FMO13354.5prime
CAGTCGACATGAAGTTCCTGCCTCTGTTCGCCTTTTTCCTAATCCTCGGC
TACTCCTCCTTCTGCAGCGGAGCTGCTGTGGCCAAGCCCACTGGTCAACC
CGGTTGCCAAACGGCCGAGGAGCTGGAGGTGGCATTCTATGCCCACTTCT
ACCTGAAGAGCTCCTACTGGGTGTGCTCCACCCAGGGCGTTCCCGCCACC
CTCGCCCAGTGCCCCATTGCCTCCGCCTGGTTGGACTCCGCCAAGGCCTG
TGTTCCCTGGCCCCAGTGGGTGTGGTCGCCCACTGTCCAGCCGCCCAGCC
AACCCGAAGTTGCTGCAGCAAGCTTTCTAGACCAT

FMO13354.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:34:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG14245-RB 615 CG14245-RB 35..343 9..317 1545 100 Plus
CG14245-RA 393 CG14245-RA 35..343 9..317 1545 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:34:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26728761..26729069 9..317 1545 100 Plus
Blast to na_te.dros performed on 2014-11-28 18:34:06 has no hits.

FMO13354.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:56:15 Download gff for FMO13354.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14245-RA 209..527 1..317 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:20 Download gff for FMO13354.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14245-RA 25..343 1..317 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:21:10 Download gff for FMO13354.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14245-RA 25..343 1..317 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:21:10 Download gff for FMO13354.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 26728751..26729069 1..317 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:20 Download gff for FMO13354.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22554473..22554791 1..317 98   Plus