FMO13364.5prime Sequence
266 bp (266 high quality bases) assembled on 2013-02-11
> FMO13364.5prime
CAGTCGACATGAGGTCGTTTTGTATATTGGCCTTATTAATAACCCTTAAG
TTCGAAATGGGATATGGAAATTCTGTCTGCAATCTTCAGGCCACATTCAT
TGGATGGTGTAAAATGACTATAAGAGGATTTACTTTCGTAGCTTCCAAAA
ACGCATGCCGTAGAATTTCTGGACCATGTGCTGCACAGGATAACTTTTTC
ATGGACAAAGCTTCCTGCGAAACAGCATGCAAAAAAATAATATTACCTGC
AAGCTTTCTAGACCAT
FMO13364.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:35:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sfp24C1-RA | 363 | CG42466-RA | 27..266 | 9..248 | 1200 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:35:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3700820..3700995 | 73..248 | 880 | 100 | Plus |
| 2L | 23513712 | 2L | 3700700..3700763 | 9..72 | 320 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:35:01 has no hits.
FMO13364.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:56:25 Download gff for
FMO13364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp24C1-RA | 25..270 | 5..252 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:57 Download gff for
FMO13364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp24C1-RA | 25..270 | 5..252 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:21:41 Download gff for
FMO13364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp24C1-RA | 25..270 | 5..252 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:21:41 Download gff for
FMO13364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3700698..3700763 | 5..72 | 97 | -> | Plus |
| 2L | 3700820..3700999 | 73..252 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:57 Download gff for
FMO13364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3700698..3700763 | 5..72 | 97 | -> | Plus |
| arm_2L | 3700820..3700999 | 73..252 | 98 | | Plus |
