FMO13365.5prime Sequence
644 bp (644 high quality bases) assembled on 2013-02-11
> FMO13365.5prime
CAGTCGACATGACCAAGGGCGTGAGGATTTGCAACGATGGATTGCCTGGT
TTGCCGAATGAAAGGCCATATTCCCGAAGAACTTTAGATACGCGGCAAAA
GACTCAGAAGATGTCCTCCAGGCCATCTAGGAAACCATTGCAGTCTCTAC
AAACTGTCGGTCGGAATACGAGTTCCAGCCTGAAGCGCATAGGAAGTCCG
ATCTCCGAGGAAGAATTTGGTGTCCTGGTGCAGCAGGATTGTAAGGCAGA
GCAGCATCACACCGATCGCCAAAACCTGGCGGACATAATCCTTATGCAGG
CCCGTCGCATCGAGAAGCAGCAGCGGGAGATGAAAAGAATAAAGGCGCAC
TATGAGCGCCAGGTGTCCACCATCAAGAACAATGCCATCATGCTGGAGTC
GCATCTGCAAAAGGTGCTGGCCAGTGTCGAAAGGGATCGGGCCAAGCGGA
TTGGCCACCACTGCCAGGACATGCTCGGTGCCGTGGAGAAGCTGCAAAGG
AGCGACATCCAAGTGAAGCCGCAATCTTCGGCCAACCAATTGCTGATCCA
GTATCTTCACTCCAAGAAAATTTCGCATTCGACCAAGAAGTCCAATGAAA
ACACAAGTAGGTACAGGAATATGTTGGCAAGCTTTCTAGACCAT
FMO13365.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:35:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6333-RB | 2133 | CG6333-RB | 1397..2014 | 9..626 | 3090 | 100 | Plus |
| CG6333-RA | 1028 | CG6333-RA | 296..913 | 9..626 | 3090 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:35:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17480248..17480865 | 626..9 | 3090 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:35:07 has no hits.
FMO13365.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:56:26 Download gff for
FMO13365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6333-RA | 296..917 | 9..630 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:01:03 Download gff for
FMO13365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6333-RA | 296..917 | 9..630 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:21:45 Download gff for
FMO13365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6333-RA | 296..917 | 9..630 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:21:45 Download gff for
FMO13365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17480244..17480865 | 9..630 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:01:03 Download gff for
FMO13365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17473344..17473965 | 9..630 | 99 | | Minus |
