FMO13366.5prime Sequence
278 bp (278 high quality bases) assembled on 2013-02-11
> FMO13366.5prime
CAGTCGACATGTTAAATTTAAAACACTTTGCCAGCCACGCCTACCGCCAG
TACGAACTGGTGACGTGCGTGAACATGCTGGAGCCCTGGGAAAAGAAGCT
GATCAATGGATTCTTTCTGGTGATGCTGCTCCTGGTGCTCTTCTCCAGCT
TCATGTATCTTCCCAACTACATGCAAACCCTAATGCAATTTGTAACGCCG
CCCAACTGGCACAATTCCCCGGATAGCGCAGCCTATGTGGCACAAAAGAT
CGCACGGAGCGCAAGCTTTCTAGACCAT
FMO13366.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:35:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34293-RB | 740 | CG34293-RB | 48..299 | 9..260 | 1260 | 100 | Plus |
CG34293-RA | 446 | CG34293-RA | 48..299 | 9..260 | 1260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:35:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 27165216..27165370 | 260..106 | 775 | 100 | Minus |
3R | 32079331 | 3R | 27165432..27165528 | 105..9 | 485 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:35:12 has no hits.
FMO13366.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:56:28 Download gff for
FMO13366.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34293-RA | 40..309 | 1..272 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:01:06 Download gff for
FMO13366.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34293-RA | 40..309 | 1..272 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:21:48 Download gff for
FMO13366.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34293-RA | 40..309 | 1..272 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:21:48 Download gff for
FMO13366.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27165206..27165370 | 106..272 | 97 | <- | Minus |
3R | 27165432..27165536 | 1..105 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:01:06 Download gff for
FMO13366.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 22990928..22991092 | 106..272 | 97 | <- | Minus |
arm_3R | 22991154..22991258 | 1..105 | 96 | | Minus |