FMO13375.5prime Sequence
809 bp (809 high quality bases) assembled on 2013-02-11
> FMO13375.5prime
CAGTCGACATGAGCCACGAGATTCGTTGCTGTAAGGTCTTCAAAATGAAG
GGATCGACGCTGGACAAAATCTCCGCCTTCCTCGGCGAGCTCATCGGCAC
CGGCATCCTGGTCTTCCTGGGCTGCATGGGTTGCGTGAAGACGGACCTCT
TTCCCAACAACCATCTGCAGATTGTGCTGAACTTCGGCTTCGCCGTCCTC
ATCGCCATCCAGTGCTTTGGCTGCGTCTCCGGTGCCCATCTGAATCCCGC
CGTGACCGTGGCCGCCTACATCTACGAGATGGTCACCCTGCGCATGGCAT
TTGCCTACTTCGCCGCCCAGATGCTGGGCGCCTTCATCGGCTACGGCCTG
CTCATGGTCCTGCTTCCCTCGCCCACACTTACGGTGGGCGCTGGGCTCTG
CGTGACCTTGCCCCACACCAGCGTAACCACGGGCCAGGCCCTCGGCATCG
AGTTCGTAATCACCTCCATCCTGGTCATCGTCTGCTGCGGAGTGTGGGAT
CCGCGCAACTCCAAGTTCCATGACTCCGTGGGCATTCGATTTGGCCTGGC
CATCGCCTGTCTCGCCTGCGCTGCCGGTCCCTTCACCGGCGGCAGCATGA
ACCCGGCCAGGTCGTTCGCCCCCGCCCTGTGGAACAAGCACTTCGAGAGC
AACTGGATCTACTGGCTGGCCCCGCTGAGCTCCTCCGCCATCACCGCCTA
CGCCTACAAGGTCGTCTTCCGCCGCGAGGTGGTTGAGGCGGAGATCACCT
CCAATGAGAAGCTGCGGCAACTGGAGGACGTCCAGCTGTCGGCAAGCTTT
CTAGACCAT
FMO13375.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4019-RC | 1138 | CG4019-RC | 112..894 | 9..791 | 3915 | 100 | Plus |
CG4019-RF | 1271 | CG4019-RF | 261..1027 | 25..791 | 3835 | 100 | Plus |
CG4019-RE | 1183 | CG4019-RE | 173..939 | 25..791 | 3835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23608131..23608682 | 576..25 | 2760 | 100 | Minus |
2R | 25286936 | 2R | 23607836..23608051 | 791..576 | 1080 | 100 | Minus |
2R | 25286936 | 2R | 23604625..23604800 | 352..177 | 400 | 81.8 | Minus |
2R | 25286936 | 2R | 23606358..23606443 | 267..182 | 205 | 82.6 | Minus |
Blast to na_te.dros performed 2014-11-28 18:43:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
diver2 | 4917 | diver2 DIVER2 4917bp | 4100..4150 | 799..747 | 116 | 71.7 | Minus |
FMO13375.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:57:56 Download gff for
FMO13375.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4019-RC | 94..888 | 1..796 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:06:21 Download gff for
FMO13375.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4019-RC | 104..898 | 1..796 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:13 Download gff for
FMO13375.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4019-RC | 104..898 | 1..796 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:26:13 Download gff for
FMO13375.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23607832..23608051 | 576..796 | 99 | <- | Minus |
2R | 23608132..23608681 | 26..575 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:06:21 Download gff for
FMO13375.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19495355..19495574 | 576..796 | 99 | <- | Minus |
arm_2R | 19495655..19496204 | 26..575 | 100 | <- | Minus |