FMO13389.5prime Sequence
1028 bp (968 high quality bases) assembled on 2013-02-11
> FMO13389.5prime
CAGTCGACATGAGCAGCGGCACCGCCGGCTGCAAGCGCGCGCACAGCATC
GAGGTTGAGCAGCCGCTGACGTCGGAGCGCCTGGAGCACAGCCTGCTGTT
GGTCAAGGGACGCCTGGTGCCCAAGTGTTCCACGGCGCGTCAACTGAAGG
CGATCCTCGATCTGCCCGAGCACCTGTCCCAGGAGCAGCTCACCCAGCTG
TCGGCCGGCGGCGAGTTTAAGCTCCTATTCGACTTGGAACAAGCGAATCG
CGAGGAGGAGGAGGAGGAGAGCGCCTGCCTCCTGGAGTTGCGATCCTGCA
CGGCCACCCGAACGATTAGCTTCAGTTACCGGCCCCGCCGCAGCTCCTAC
CGGGTGCAGCCGCTCTACCTGCTCTGTCAGGACGAGGAGAAGACGCTGGC
GCAGCAGCACGAGGTGCACTCCCTCATCGATCTTAATTTGCGGCTGGTGC
AGTCCATCTACGCGCACAAACTGCACGCGGCGGGCTTTCCCAACCGCACC
TTCACGCTCAACGGCAAGTGCTGCGCCTTCCGCAGCCAGTTGACCCGGAA
ACAGGCGCTGGCGAAGAGCGAGGACGAGCTGTGGCAGCATTTCGCCGGCG
AGATTATCGCCTGTCCGCAGTGGGGCCACCAGTTGCTCCTCAAGTTCGTC
GCCTTTGTGGGCTGCACGCGCTACGACGGCGACGCAGTGGTGGCCAGCGG
TGACTCCTCGTACGCCAACATCCGGCGGCATCTCAAGGGACACGCAGCAC
TCGGTGGCGGCGGCTTGTCGCTCTTTGGTAGTGCCCACTTCTACGCGTGG
CCCACGAGCTTCGCGGAGATCGGCGACTGTGTGCGCAGCGCCCAGCGGGT
GGACATCGCCCGCCTGCCGGACGAGAGCAACTATCGGCGGACGTACGGCG
GCGTCTATTGCCAGCACCTTGGCGCCGTGTGCACGAACTGGGCCACTGCT
TCGATCTGGGACCACACCAGCGAAGGAGATGATGGTCCAGGGCTTCGACT
ACTTGAATCTCGTGTTGACGGTGGAACA
FMO13389.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6299-RB | 2551 | CG6299-RB | 107..1122 | 9..1025 | 4880 | 98.9 | Plus |
| CG6294-RB | 2306 | CG6294-RB | 107..1122 | 9..1025 | 4880 | 98.9 | Plus |
| CG6294-RA | 2551 | CG6294-RA | 107..1122 | 9..1025 | 4880 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15462828..15463843 | 9..1025 | 4755 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:44:20 has no hits.
FMO13389.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:58:08 Download gff for
FMO13389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6294-RA | 114..1130 | 9..1027 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:07:07 Download gff for
FMO13389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6294-RA | 107..1123 | 9..1027 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:55 Download gff for
FMO13389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6294-RA | 107..1123 | 9..1027 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:26:55 Download gff for
FMO13389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15462828..15463844 | 9..1027 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:07:07 Download gff for
FMO13389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15356861..15357877 | 9..1027 | 98 | | Plus |
