FMO13390.5prime Sequence
984 bp (984 high quality bases) assembled on 2013-02-11
> FMO13390.5prime
CAGTCGACATGCATAACAACAGCTGTTTAGAACCCATGGACAGGACCAAG
ACTACGAAACTTCCTCAGCTCAAGTCCAGCGTTACTCCCTACAGACCAAA
GCCGAACCTAATCCGTAGTGATTCCCCGAAATTAGAGAACGATAAGCGTA
ATGGGCTGGACTTGGAGCTTCTGGATAATCCAGAGATACCGAGCGTAAAG
CGAGTACGATGGGCTCCGATGTATGGGGAAAGGAGCCCGAGTAAGACCGG
CTTTACCAGCGTTCCACTAAGCTCCAAAAAGGCGCAGTTTGATCATGATA
CGACAGATGAGTTAATACTGGCTAACGAGCTTCGATTAGCGGTGCATCGT
GGGGGAGGTTCCATAGATCCCGACAAGAACTACGAGCTGAGGGCTCGACT
GTCGCCCTTGCAATTGCCGTACAGTCGAGTGCAGCGAATTCTGAAGGAGT
GCGAGTTGAGCGAGAGGAATCATCACACCTATAGTATACCCATGGACTAT
GGGCGGCAATTGGTTGCCATGGTTTGCAAGATCAGGACGGATAATCTCCC
CGAACTGAAACTTCGCTTGGCCTCCTTACTGCGGCAAAACAAAGCGCGCT
TCTTCAATCGACATTTATTCAACGAAACTGGCTTGATTGAGGCCACATTG
CCGAGCGTAACACCATTAAGCTTTGAGGAATTCAATCAAACGTTGCGAAT
TGATGCTTTGTGGTGCAAAGCCACCGATAGTACCATTACCGATTTGGCCA
AAGGATCTGTTTTGTTCAAATGTCGGCCTCTGGACCTGCAAGAGGTCGCG
TACAAACTCACGCAGTGCAACTACAAGATTGTACATAAGGAGGTTGGACA
CTGTCCAAACAAGCCGCTCGTCGAGTTAAATGATCGTCAAATGGCCCGCT
ATCAGAGTTTCGTAAAAACCTTCTTCAGACATAGATGTCGTAAGATCTAT
GACATGTGCGTGTCCAGGCAGCTTTCTAGACCAT
FMO13390.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31244-RA | 1138 | CG31244-RA | 86..1048 | 9..967 | 4700 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19397520..19398482 | 967..9 | 4600 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:44:23 has no hits.
FMO13390.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:58:09 Download gff for
FMO13390.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31244-RA | 78..1057 | 1..979 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:07:08 Download gff for
FMO13390.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31244-RA | 78..1057 | 1..979 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:57 Download gff for
FMO13390.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31244-RA | 78..1057 | 1..979 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:26:57 Download gff for
FMO13390.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19397511..19398490 | 1..979 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:07:08 Download gff for
FMO13390.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15223233..15224212 | 1..979 | 98 | | Minus |
