FMO13391.5prime Sequence
647 bp (647 high quality bases) assembled on 2013-02-11
> FMO13391.5prime
CAGTCGACATGCTAAAGGGTAGCACACTGAAAGCCCTGGACGTCAGAATC
CTATGGCCCCTTATTGAAACAAGTGGAGGACACCAGCGCAGCTTCTCCAG
CAGCACCCACCGGTCCTACATAACATTCAATGATTTCCGCAAAAAACACC
GCTGGTACACAAAAAAGGAGCTTGTGGGCTACTCCATGCAGGACATGTAC
AGCGTGGTTTCCGACGTCAGCAATTACCACAAGTTCGTGCCGTATGTGAA
GCGCTCCGATGTGCACAGCCGGGGAAGTGAGGGCTTCAAGGCGGACCTCA
TTGTTGGCTTTCCGCCGCTTAACGAGGCCTACACCTCGCAGGTGACCCTG
GTGCCGCCCAGCTTGGTTAAGTCAGAGTGCCACGATGGACGTCTGTTCAA
CTACCTCCTGAATGAGTGGTCTTTTAAGCCGGGCCTCAAGGACATACCTA
ACTCCTGCGTGCTGGACTTCAAGGTATCGTTCGAGTTCAAGTCCCTCCTG
CACAGCAACGTCGCCAACATATTTTTTGACCTTATCTGCGATCAAATGGA
AAACGCTTTTATCCAGGAGGTCCGTCGACGGAGTGGTCCGCCCTCAATCC
GCTCCCACGTGCTTACTTCGGATCGGTCCGCAAGCTTTCTAGACCAT
FMO13391.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9410-RA | 891 | CG9410-RA | 137..757 | 9..629 | 3105 | 100 | Plus |
| CG9410-RE | 833 | CG9410-RE | 71..699 | 9..629 | 3015 | 98.7 | Plus |
| CG9410-RB | 930 | CG9410-RB | 239..796 | 72..629 | 2790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 6669491..6669942 | 178..629 | 2260 | 100 | Plus |
| 2R | 25286936 | 2R | 6669328..6669434 | 72..178 | 535 | 100 | Plus |
| 2R | 25286936 | 2R | 6669160..6669224 | 9..73 | 325 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:44:29 has no hits.
FMO13391.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:58:11 Download gff for
FMO13391.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9410-RA | 137..757 | 9..629 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:07:12 Download gff for
FMO13391.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9410-RA | 137..757 | 9..629 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:27:02 Download gff for
FMO13391.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9410-RA | 137..757 | 9..629 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:27:02 Download gff for
FMO13391.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 6669160..6669224 | 9..73 | 100 | -> | Plus |
| 2R | 6669330..6669434 | 74..178 | 100 | -> | Plus |
| 2R | 6669492..6669942 | 179..629 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:07:12 Download gff for
FMO13391.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2556665..2556729 | 9..73 | 100 | -> | Plus |
| arm_2R | 2556835..2556939 | 74..178 | 100 | -> | Plus |
| arm_2R | 2556997..2557447 | 179..629 | 100 | | Plus |
