FMO13392.5prime Sequence
488 bp (488 high quality bases) assembled on 2013-02-11
> FMO13392.5prime
CAGTCGACATGTTTAGCCAGCACAACGGTGCAGCAGTACATGGCCTTCGG
CTCCAGTCGCTGCTCATCGCAGCCATGCTCACCGCTGCAATGGCAATGGT
CACGCCGACTGGCAGTGGTCACCAGTTGCTGCCCCCCGGAAACCACAAAC
TCTGCGGCCCCGCACTGTCCGATGCCATGGATGTGGTGTGTCCCCATGGC
TTTAATACGCTGCCAAGGAAACGTGAAAGCTTGCTGGGCAACAGCGACGA
CGACGAGGACACGGAGCAGGAGGTGCAGGATGATAGCAGCATGTGGCAGA
CACTGGACGGGGCAGGATACTCTTTTAGTCCACTGCTAACCAATCTGTAC
GGATCCGAGGTCCTGATCAAGATGCGTCGCCACAGGAGACACCTGACCGG
TGGCGTCTACGACGAGTGCTGCGTCAAGACCTGCAGCTACTTGGAGTTAG
CCATCTACTGTCTACCGAAAGCAAGCTTTCTAGACCAT
FMO13392.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ilp1-RA | 465 | CG14173-RA | 1..462 | 9..470 | 2310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9798434..9798895 | 9..470 | 2310 | 100 | Plus |
| 2L | 23513712 | 2L | 23338273..23338510 | 9..246 | 1070 | 96.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:44:32 has no hits.
FMO13392.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:58:12 Download gff for
FMO13392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp1-RA | 1..465 | 9..471 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:07:14 Download gff for
FMO13392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp1-RA | 1..465 | 9..471 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:27:03 Download gff for
FMO13392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp1-RA | 1..465 | 9..471 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:27:03 Download gff for
FMO13392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9798434..9798895 | 9..470 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:07:14 Download gff for
FMO13392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9791534..9791995 | 9..470 | 100 | | Plus |
