FMO13393.5prime Sequence
407 bp (407 high quality bases) assembled on 2013-02-11
> FMO13393.5prime
CAGTCGACATGATGTCGTTCGGCAAGATTGTGGTATTCCTGGTCCTAGTC
CTAGTTCAACTAATCCATTGTACGCGCTTTACTGCGCCATCTTTGGACAG
GACCATCTACTACCGGAATACGCCACCCGATCCCTTCGGTCACTACAGCT
TCGAGTTCCAGACCACCAACGGCATTACCACCAAGGGAGCTGGTAATGAG
AACGGAGCCGTCGGAGTGGTTCAGTTCGTTTCTCCCGAGGGTATACCCGT
TACCTTCTCGTACGTGGCCGATGCCAATGGATATCAGCCCACCGGAGATC
ACATTCCCGCCATCCCGCTGCACGTTATCCGCCAGTTGGAGTACATCCGC
ACGCATCCACCGGTGGATGAGATTCGGTCCAGACGTTGGGCAAGCTTTCT
AGACCAT
FMO13393.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr78Ca-RA | 876 | CG11310-RA | 134..514 | 9..389 | 1905 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21292222..21292586 | 389..25 | 1825 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:44:34 has no hits.
FMO13393.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:58:13 Download gff for
FMO13393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr78Ca-RA | 1..384 | 9..393 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:07:16 Download gff for
FMO13393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr78Ca-RA | 128..517 | 1..393 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:27:04 Download gff for
FMO13393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr78Ca-RA | 128..517 | 1..393 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:27:04 Download gff for
FMO13393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21292218..21292584 | 27..393 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:07:16 Download gff for
FMO13393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21285318..21285684 | 27..393 | 99 | <- | Minus |
