FMO13394.5prime Sequence
332 bp (332 high quality bases) assembled on 2013-02-11
> FMO13394.5prime
CAGTCGACATGTTAAAACTTTTGCTGCCATTAGCTATTGTGTGCCTGTTT
ATGGCTCACATACAAGCCAATCCCGAAGAAGCTAACAGGCGTCATAAAAT
CTGCATTCGCACCTACGATAAGTGTATTGAAAATGAAGCTAGGTTGGGAA
AACAGGACGATACTTCAAAGTTCTTTAACGACTACTGTCGCCGTTCGGAT
TCTGGATGGTCAGATGTTAGCCGATGTGATCTTCTGCGAATAGCCTGTTT
ATCTACTGTGCGCGATTGCGAAACACCGACTTGCAAGAATGTTGCCCACC
GCATGCGTCTTTGGGCAAGCTTTCTAGACCAT
FMO13394.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:28:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eig71Ei-RB | 530 | CG7327-RB | 35..341 | 8..314 | 1535 | 100 | Plus |
| Eig71Ei-RA | 393 | CG7327-RA | 35..341 | 8..314 | 1535 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:28:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15659819..15660039 | 32..252 | 1105 | 100 | Plus |
| 3L | 28110227 | 3L | 15660101..15660162 | 253..314 | 310 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:28:08 has no hits.
FMO13394.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:55:13 Download gff for
FMO13394.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eig71Ei-RA | 27..350 | 1..323 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:56:36 Download gff for
FMO13394.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eig71Ei-RA | 27..350 | 1..323 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:59 Download gff for
FMO13394.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eig71Ei-RA | 27..350 | 1..323 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:59 Download gff for
FMO13394.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15659821..15660039 | 34..252 | 100 | -> | Plus |
| 3L | 15660101..15660171 | 253..323 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:56:36 Download gff for
FMO13394.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15652921..15653139 | 34..252 | 100 | -> | Plus |
| arm_3L | 15653201..15653271 | 253..323 | 94 | | Plus |
