FMO13407.5prime Sequence
1133 bp (1020 high quality bases) assembled on 2013-02-11
> FMO13407.5prime
CAGTCGCCATGTCGCAGCTGAACGCGGAGACCCAGCAGAGGCACTTCATC
ACGCGCAGCAGTTATGAGGGCGCCTGGGATAGATTGGTGAATGTGATGGA
CGGATTTGGGAGCTACCGCTATCCGGATGGGAGCGAGTATCGAGGAAGGT
TCCATCAGGGTCAGTTCCACGGCTATGGCCATTTGCGACTCGCCCAGCCG
TACCGCTTTACGGTTAAGGGTGAGTTCGAGCATGGTCGCCTGGTGACAGT
GGAGGACATGTGGTTTTCCGACGGTCTGCATGTGGATGGCAGATTTAATG
GCATGGTCTTGCAGTGCGATGAATGGGATTACCTGACGCCGAAGGATCGG
CGTTATCATGCCGAGCGTCGTTATGGCCAACAGCCGGTTGGCCCCACTGC
CTTTCTTACATCCAAAATGCAACCCAGAAATATTCCCGAACATTGCTATG
ATGTGGAGGAGGGTCTGTTCAATAGTAAGACCTGTTGGTTGACGGACCGT
CCGAGTCCGCTCCATCAATTCATGTACGTGAGCTGCCCGCAAGATAAGGA
TTGGATTAAGAAGAATTGCAGGAAGGCTAGAACATCGCGTATAATTGAGC
CACCATCCGACTTCTGTCGCCGCATTATAGCCAACAATTTGGCAACGGAA
CGAGCCCAGTTGCGAAGCACGGCCATATATGCACCCAATGGACAAGTGGA
TCGGGAGCGATACTTCCACAAGTTGACCAAGAAACGTGGACAGCCGAATG
AGCCGCTGGAGAACATTCCAAGGCGTCCCATGCCCGTCGACGATCCCGCC
TGGGAGACGGAGATGTGTGTGCGTGCCTATGCCGGGATGTTGGATAAACA
GCAGAAGGATCAAATGGAGTTTAAGCGCGTGCATCCTTGCGCCAAATGGA
GACGGTGAAGAGACCACGCCGATGGTCGAGCACCTCAGATGTACGCAATC
CGCAGTCGGTGGACCCTCCAGCTGCAGACGGACAGCTTTGGCGAGGATGA
CCTGGTCTAAACCTTTGAGAAATCATACGCTCGGCACAACATGATGAGAA
CGGGACGGCGGGATAACTAAATGGTGGGGCAATCTATCTAATCGCGCCAT
AGCTACCTGGAACTGACCGTCATATTTCGAGTG
FMO13407.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:45:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3222-RA | 1354 | CG3222-RA | 86..1204 | 9..1118 | 4960 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:45:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9599073..9600095 | 9..1028 | 4740 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:45:05 has no hits.
FMO13407.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:58:25 Download gff for
FMO13407.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3222-RA | 86..1157 | 9..1073 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:07:37 Download gff for
FMO13407.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3222-RA | 86..1157 | 9..1073 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:27:26 Download gff for
FMO13407.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3222-RA | 86..1157 | 9..1073 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:27:26 Download gff for
FMO13407.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9599073..9600144 | 9..1073 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:07:37 Download gff for
FMO13407.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9592173..9593244 | 9..1073 | 97 | | Plus |
