FMO13409.5prime Sequence
803 bp (803 high quality bases) assembled on 2013-02-11
> FMO13409.5prime
CAGTCGACATGATCACCTCGAAGCTGCGCCTGCGCCGAGCACAGATTCCC
AGGTTTTCGATCACGAGTCGATGGTACAATTGGGGCAGCTACGATGCCAG
CTCTGGGGAGTGCTGCAAGATGCGCGACAAGGATACCACGGCCTGCAAGG
ATGGAAAGTGGTTCTGTCCGGTCAAGTACGAGCCCAACAAGTGTTACGAG
AAACCATCCTTTGCAGTAGAAGAATACTCCCAGTATCTGCAGGAGATCTA
TAATCGAGGCAAGACCAATCCCGACTGCTTGCTGAAGCTGATCCGCCACG
ACGCTGAACATTACAAGCCGTCAGATAAGCAGCGCAAATTCCAAAGGACT
TGGCCAGAGTGTCCGCTCCTCTGGCTACGACCAAAGGACTATTGCTGTCC
CGATCAGGAGGTATATCAGCCCATGAATCGTCGCATCCGCCCCCCGCAGG
AACCACCACTTTCGGCTATTGAAAAGCACCTCTTCCAGATGAGTATCTTT
TGCAAGTCCGTCAGGGCTCCCTGTTGTAAAGTAGGTCGACGTCCGCCCAA
ATGCACCAAGCCGCGGAGGCCATCCGAATGCTGCAAGAAGTTCACTCCGA
TGCCTAGTTTTTCGGAGGCCTGCCGCCATCTGATACCACGATTCTGTGGC
TCCGAGTGTGCCTGTCGTGGAGGGAGCTTATGTGAAATGTGGAACACGTA
TAATATGTGCAACAAGTCGCGCAGGAACTGCACCAAGCCGTTAATAGGGT
ATTCTCCGTTACGATCCAGGATGCGATTTCCATTTGCAAGCTTTCTAGAC
CAT
FMO13409.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:45:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| swif-RB | 2074 | CG30366-RB | 56..833 | 8..785 | 3845 | 99.6 | Plus |
| cola-RA | 2074 | CG30363-RA | 56..833 | 8..785 | 3845 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:45:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8364513..8365290 | 785..8 | 3845 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:45:10 has no hits.
FMO13409.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:58:28 Download gff for
FMO13409.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cola-RA | 49..842 | 1..793 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:07:40 Download gff for
FMO13409.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| swif-RB | 49..842 | 1..793 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:27:29 Download gff for
FMO13409.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cola-RA | 49..842 | 1..793 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:27:29 Download gff for
FMO13409.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8364504..8365297 | 1..793 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:07:40 Download gff for
FMO13409.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4252009..4252802 | 1..793 | 98 | | Minus |
