FMO13411.5prime Sequence
803 bp (803 high quality bases) assembled on 2013-02-11
> FMO13411.5prime
CAGTCGACATGCAGAGCGACTTTCACAGAATGAAGAACTTTGCCAATCCC
AAGTCCATGTTCAAAACCAGCGCCCCCAGCACCGAGCAGGGTCGTCCGGA
ACCACCAACTTCGGCTGCAGCGCCCGCCGAGGCTAAGGATGTCAAGCCCA
AGGAGGACCCACAGGAGACTGGTGAACCAGCAGGCAACACTGCAACCACT
ACTGCTCCTGCCGGCGACGATGCTGTGCGCACCGAGCATTTATACAAACA
CCCGCTCATGAATGTCTGGACGCTGTGGTACCTTGAAAACGATCGGTCCA
AGTCCTGGGAGGACATGCAAAACGAGATCACCAGCTTCGATACCGTCGAG
GACTTCTGGAGCCTATACAACCACATCAAGCCCCCATCAGAGATCAAGCT
GGGTAGTGACTACTCGCTATTCAAGAAGAACATTCGTCCCATGTGGGAGG
ATGCAGCCAACAAACAGGGCGGTCGTTGGGTAATTACCCTTAACAAAAGC
TCCAAGACCGATCTGGATAACCTATGGCTCGATGTGCTGCTCTGCCTGAT
TGGTGAGGCCTTCGATCACTCCGATCAGATCTGCGGCGCTGTTATAAACA
TTCGCGGCAAGAGCAACAAGATATCCATCTGGACTGCCGACGGAAACAAC
GAGGAAGCTGCCCTTGAGATTGGTCACAAGCTGCGCGATGCCTTGCGTCT
GGGACGCAACAACTCGCTGCAGTATCAGTTGCACAAGGACACGATGGTCA
AGCAGGGCTCCAACGTGAAATCGATCTACACTTTGGCAAGCTTTCTAGAC
CAT
FMO13411.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF-4E-RI | 1793 | CG4035-RI | 760..1538 | 7..785 | 3850 | 99.6 | Plus |
eIF-4E-RH | 1492 | CG4035-RH | 459..1237 | 7..785 | 3850 | 99.6 | Plus |
eIF-4E-RD | 1723 | CG4035-RD | 690..1468 | 7..785 | 3850 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 9400583..9400953 | 436..66 | 1855 | 100 | Minus |
3L | 28110227 | 3L | 9399873..9400033 | 785..625 | 790 | 99.4 | Minus |
3L | 28110227 | 3L | 9400419..9400519 | 536..436 | 490 | 99 | Minus |
3L | 28110227 | 3L | 9400097..9400185 | 624..536 | 430 | 98.9 | Minus |
X | 23542271 | X | 1158961..1159338 | 643..266 | 375 | 73.3 | Minus |
3R | 32079331 | 3R | 29026520..29026848 | 634..306 | 355 | 73.9 | Minus |
3L | 28110227 | 3L | 9401040..9401098 | 65..7 | 295 | 100 | Minus |
3L | 28110227 | 3L | 6665168..6665336 | 435..267 | 290 | 78.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:44:42 has no hits.
FMO13411.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:58:16 Download gff for
FMO13411.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-4E-RF | 283..1072 | 1..791 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:07:23 Download gff for
FMO13411.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-4E-RD | 684..1473 | 1..791 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:27:09 Download gff for
FMO13411.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-4E-RD | 684..1473 | 1..791 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:27:09 Download gff for
FMO13411.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 9400419..9400518 | 437..536 | 99 | <- | Minus |
3L | 9399868..9400033 | 625..791 | 97 | <- | Minus |
3L | 9400097..9400184 | 537..624 | 98 | <- | Minus |
3L | 9400583..9400953 | 66..436 | 100 | <- | Minus |
3L | 9401040..9401103 | 1..65 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:07:23 Download gff for
FMO13411.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 9392968..9393133 | 625..791 | 97 | <- | Minus |
arm_3L | 9393197..9393284 | 537..624 | 98 | <- | Minus |
arm_3L | 9393519..9393618 | 437..536 | 99 | <- | Minus |
arm_3L | 9393683..9394053 | 66..436 | 100 | <- | Minus |
arm_3L | 9394140..9394203 | 1..65 | 95 | | Minus |