FMO13415.5prime Sequence
1106 bp (1038 high quality bases) assembled on 2013-02-11
> FMO13415.5prime
CAGTCGACATGGCATTCTCGCAGTCGTTCAACTTCGGAAACAGCACCTTA
ATGGCGCTGGAGAAAGGAATGCAAGCGGACGACAAGGAGAATGCACAGCC
AGGAAACGGAAATATCCAAGTCCAAAGTGCCGGCAATGAGGTAAATAGCG
AGATCCAGGAAATTAACTCGGAGTTTTTCCGGGACGAGTTCTCCTACGAA
GTGAATCAGGCCCATAAGCCAGCTGAACAATCAGTGGTCAATGTGTCTCA
GGTTCAGCAGCATATGGCAGTTGTTTCCAATCAGGACTCTGAGGATCAGA
GCCGCTCATCCGCTTTGAATGACCAAATCTGCACACAGTCTTCGTTCGAG
GGCGAGGACGCAGGCGCGGATGCAGTGCTGGATCAGCCCAATCTGGATGA
GAACAGCTTTTTGTGTCCTGCGCAGGATGAAGAGGCTTCCGAGCAGCTGA
AGGAAGACATCTTGCACAGTCATTCCGTATTGGCCAAGCAGGAATTCTAT
CAAGAGATTTCGCAAGTCACGCAGAACCTGAGCAGCATGTCGCCCAACCA
ACTGCGAGTGTCGCCCAACTCCTCGAGGATCCGCGAAGCGATGCCCGAAA
GACCAGCAATGCCACTTGATCTCAACACGCTTAGATCAATAAGCGCATGG
AACCTGCCCATGAGCATTCAAGCGGAGTACAAGAAGAAGGGTGTTGTCGA
TATGTTCGACTGGCAGGTGGAGTGTCTCTCCAAGCCTAGATTGCTGTTTG
AGCACTGCAACCTGGTTTATTCAGCACCCACGTCGGCAGGCAAGACGTTG
GTTAGTGAGATACTGATGCTGAAAACCGTACTGGAGCGAGGTAAAAAGGT
GCTGCTCATACTGCCCTTCATCTCGGTGGTGCGCGAGAAAATGTTCTACA
TGCAGATCTGCTCACGCCGGCTGGTTACCGCGTGAGGGATTCTACGCGGC
TATACGCCACCAGGAGGCTTTGAGAGCTCATGTGCCATTTGCACAATTGA
GAAGCGACCTCCATTGTGAACAGCTGATGGAGCAGGCAACTGAACAATGC
ATGGTGTGGTAGAACGAAGTGCTACTCATTTCGGAACAGGGACGGCGCTA
TATCTG
FMO13415.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:45:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mus308-RA | 6420 | CG6019-RA | 93..1202 | 9..1104 | 5065 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:45:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12711172..12712207 | 1036..9 | 4800 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:45:28 has no hits.
FMO13415.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:58:34 Download gff for
FMO13415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mus308-RA | 85..1140 | 1..1047 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:07:51 Download gff for
FMO13415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mus308-RA | 85..1140 | 1..1047 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:27:40 Download gff for
FMO13415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mus308-RA | 85..1140 | 1..1047 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:27:40 Download gff for
FMO13415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12711160..12712211 | 1..1047 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:07:51 Download gff for
FMO13415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8536882..8537933 | 1..1047 | 98 | | Minus |
