Clone FMO13425 Report

Search the DGRC for FMO13425

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:134
Well:25
Vector:pMK33-CFH-BD
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO13425.5prime Sequence

599 bp (599 high quality bases) assembled on 2013-02-11

> FMO13425.5prime
CAGTCGACATGATTAAGGAAATATACTTCCAACTCGTCATTGTTTCGCTG
GCTGTACTGTTACCAGCGAATAGTTATCCCCTGGAGCCAAATGCGGAAAA
TGCATGCGAATTTATCAGGAACGTTGCGCGATTTCCAGACGATGAGAATG
CTTGGTGGGAAAAGAGTAAAAGTTTAGCCAATTCCATTTTGGAGACCAAA
ATCAATTATAAAGGATCATACCGTTCCTGTAACCAATATGTTGCTACCCT
ACAAAATCTAAAAAATCGTGGAAATGAATTAAATGCATCCAGTCCTTGGG
CACAAATAATTGAATATCTTAACGCATCCTCACAGGAATATGAAGGTGGT
CCGTGTACTGATGAGGAACCCTACAGTTATATATATTCAAGTAACATTAA
AAACATGAAAAACGATATACGCGAATTGAGTCAACATGTGAAAGATCAAA
TCGAATATCATAATTTGGTGGCACATATTGATACGAATGTCAATACGATC
ATAAATACATTATCTGGTTTCTCTATTCCGATATTGAAGTATTTAACACG
GTTTCCTTCGGCAAAGTGTACTCTGCCCAATGCAAGCTTTCTAGACCAT

FMO13425.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:45:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG42763-RA 660 CG42763-RA 20..592 9..581 2865 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:45:57
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8144459..8144981 581..59 2615 100 Minus
2L 23513712 2L 8145034..8145088 63..9 260 98.2 Minus
Blast to na_te.dros performed on 2014-11-28 18:45:57 has no hits.

FMO13425.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:58:46 Download gff for FMO13425.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42763-RA 1..576 9..584 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:08:10 Download gff for FMO13425.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42763-RA 20..592 9..581 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:27:57 Download gff for FMO13425.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42763-RA 20..592 9..581 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:27:57 Download gff for FMO13425.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 8144459..8144980 60..581 100 <- Minus
2L 8145038..8145088 9..59 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:08:10 Download gff for FMO13425.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8144459..8144980 60..581 100 <- Minus
arm_2L 8145038..8145088 9..59 100   Minus