FMO13426.5prime Sequence
1098 bp (1012 high quality bases) assembled on 2013-02-11
> FMO13426.5prime
CAGTCGACATGAGTGATACCGATACGGACGACACCGATCTGCTGCTCCTG
ATACCACCGAACTTCTGCGCGGAGGACAAAATGAGCGCATGCGCGGCGGC
AGATGCGTTGGCCATGCCCCCGCCCCCTCCCCCGGCGACCACAAGTGCAG
CGTACCAGTTCCTACATCCCAGCAAGAAATCGGAGCTGAATAGCATCAAT
TCCCGGCTGCAGAACATCGCACTGGATGCGGAGGAGCCTCCCTCGGACAT
TTCCACCATATCCACGAATACTGTAAGGAACGCTGGAAGGCCAAGTAGGG
AGCTCCACGGCATGGTGCACTCCACGCCGAAGAGTGGGTCCGTTGAGCCC
CTCCGCCATCGACCACTGGACGACAACATTCTGCTCGAAATCGACCACTA
CCTAGACGACAATAATGCGCACCGTTGGCAGAGGCACGATCACCACCTGC
ATCACCGCAGCGACGATCATCTGAGGAACGAGCGGGCGGGGAAAGAGGGT
CATCCGGGAACCTCGTCTCTGCCCAGCATGAGGCTGGCCTCATCATCCTC
CGGCGCCGTTTCTGTCGAAGCAGCCAGGGTCGATCGAAGCAGCCTGAATG
AGAACAAGATCATAAGTCTGAGCGAGCTCTGGGGCAAGAGCAGCTTGACC
AAAACTGTACTCGACAACAACTCGCCCAACCGACCACTGTGCAGCTCTTC
CCTAAAAGAGGAACAACTCAGAAGGCAGCATCTGGAGAAAATGGTGCACA
CACTGCAGTCGCATCTTTTGGAGTACCAGCAGCGAATCTCAGTGGCCATC
GAGGTGGATCGTTCGAAGATGCTGCTCTCACCGAGGCAGAGCAAACAGTT
CAAAGTCTCAACTACGAGTTCAGCACCTGCGGGACGCTGTCCACCGGCTG
GAAGCGGACAGGGGCGAATCCCAGAGCCGGTTTGATGCACTGCAGAACGA
GTTGTCGCAGCGGTCAACTGCCACCAGGTTTCAGAAAGAATGATAAACTC
GAAGGAGTTGGACATGCAGCAGACGCCAGCATGGGAAGAAGATCTGAGCA
CTTGAAATGCACCTCACAGCAGCAAAGACGCGAAGAGAGCCTGTCCAC
FMO13426.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cnb-RB | 2263 | CG5690-RB | 44..1130 | 8..1076 | 4940 | 98 | Plus |
| Cnb-RA | 2453 | CG5690-RA | 234..1320 | 8..1076 | 4940 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:45:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1947859..1948861 | 8..1003 | 4735 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:46:00 has no hits.
FMO13426.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:58:47 Download gff for
FMO13426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5690-RA | 228..1257 | 1..1019 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:08:13 Download gff for
FMO13426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cnb-RA | 227..1256 | 1..1019 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:27:59 Download gff for
FMO13426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cnb-RA | 227..1256 | 1..1019 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:27:59 Download gff for
FMO13426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1947852..1948877 | 1..1019 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:08:13 Download gff for
FMO13426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1947852..1948877 | 1..1019 | 98 | -> | Plus |
