FMO13429.5prime Sequence
692 bp (692 high quality bases) assembled on 2013-02-11
> FMO13429.5prime
CAGTCGACATGGGTAAGATATCGCTATACGGCCTGGACGCAAGTCCGCCA
ACACGGGCATGTCTGCTCACCCTGAAGGCACTGGATCTGCCCTTCGAATT
TGTGTTCGTCAATCTGTTCGAGAAGGAGAACTTTAGCGAGGACTTCTCGA
AGAAGAATCCACAGCACACGGTGCCACTGCTGCAGGACGATGATGCCTGC
ATCTGGGACTCCCATGCCATCATGGCGTATCTGGTGGAAAAGTACGCGCC
AAGCGATGAGCTCTATCCCAAGGATCTGCTGCAGCGTGCCAAAGTGGACC
AATTGATGCACTTCGAGTCGGGTGTCATCTTCGAGTCTGCCCTAAGGAGA
CTCACCCGTCCGGTGCTCTTCTTCGGCGAGCCCACCTTGCCCCGCAATCA
GGTGGATCACATCCTTCAGGTCTATGATTTCGTAGAGACCTTTCTCGATG
ATCACGACTTCGTGGCCGGCGATCAGTTGACCATAGCCGATTTCAGCATC
GTATCGACCATCACCTCGATTGGTGTTTTCCTGGAGCTGGATCCGGCCAA
GTACCCTAAGATTGCCGCCTGGCTGGAGAGGCTTAAGGAGCTGCCCTACT
ACGAGGAGGCCAATGGCAAAGGAGCTGCCCAGTTCGTGGAGCTCTTGAGG
TCCAAAAACTTCACCATAGTTTCGGCAAGCTTTCTAGACCAT
FMO13429.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstE4-RA | 839 | CG17525-RA | 28..693 | 9..674 | 3330 | 100 | Plus |
| GstE10-RB | 1134 | CG17522-RB | 451..624 | 153..326 | 285 | 79 | Plus |
| GstE10-RA | 889 | CG17522-RA | 206..379 | 153..326 | 285 | 79 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18403275..18403940 | 9..674 | 3330 | 100 | Plus |
| 2R | 25286936 | 2R | 18397148..18397321 | 326..153 | 270 | 77 | Minus |
| 2R | 25286936 | 2R | 18404778..18404861 | 153..236 | 210 | 83.3 | Plus |
| 2R | 25286936 | 2R | 18407095..18407279 | 149..333 | 205 | 74.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:46:10 has no hits.
FMO13429.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:58:51 Download gff for
FMO13429.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE4-RA | 1..676 | 9..687 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:08:18 Download gff for
FMO13429.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE4-RA | 21..703 | 1..687 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:28:03 Download gff for
FMO13429.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE4-RA | 21..703 | 1..687 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:28:03 Download gff for
FMO13429.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18403268..18403950 | 1..687 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:08:18 Download gff for
FMO13429.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14290773..14291455 | 1..687 | 98 | | Plus |
