FMO13430.5prime Sequence
800 bp (800 high quality bases) assembled on 2013-02-11
> FMO13430.5prime
CAGTCGACATGGATCGTCTGCAGCAGGTCGGCGTTCAGCAGTTGGGTGAT
CTGAAGCGTGTTTTCACCCGGGAATGGCCAAAATACTGCAAGGAGTACTA
CTGCCTGGACACGTTTCTGGAGCTATATAAAAAGGACGATCAGCTGAAGG
ATGTGCAAGTCTATGCTCTTCCCAATCTAGAGCTCGGAATATTTGTGATC
GTGGATCACTATCAGATATTTGTGGGCTTCCTGGAAGCTGAACAATCAGA
AAGCCTTTTCAAGGAGTCCTTACTCAAGTTTAAGCTCTATGGAGGCGAAC
AGTTCGCCTCAATGCCAAAAAGGTATTTCAATGTTGCCAACGACATTATT
CAAGCGAAGAATCTGAAACTAGATCTCGACTGTGTAACACTTTCCCTGGT
CTTGAGCAAAGAGGAAGCCCTGCTTTTTCAAGTAGAACCTCCAGCCGGAT
TTTCCCTTAAGCCGGTAGATATAGACGATGCTCAGGTGATTAATGATCAA
TGGGAATGGAGTGAGCCGGATTCCCTTTCCGTGGTCCGCCGTCAAATTCT
GGCTCCAGATGGCTTATTGGCAGTCCTTCAGGTCAAGACGACCTACAAAC
GCAGAGGCTTCGGCCAACTGATTGTGAAGGAATTTGCGAGACAAGAGGCT
CTGCTGGGACGCGATACAATCACCGAAGTGGTTCCGGAAAACAAGGCATC
CTTGGGCCTGTTCACCAAACTGGGCTTTAAAATCAACGACCAGTGTCACT
GGCTGATGACGGAGCCGCCAAAAGGAGTTCGAGCAAGCTTTCTAGACCAT
FMO13430.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15155-RA | 909 | CG15155-RA | 11..789 | 4..782 | 3880 | 99.9 | Plus |
| CG15155-RB | 906 | CG15155-RB | 11..786 | 4..782 | 3825 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18155119..18155352 | 203..436 | 1170 | 100 | Plus |
| 2L | 23513712 | 2L | 18155591..18155822 | 551..782 | 1160 | 100 | Plus |
| 2L | 23513712 | 2L | 18154861..18155061 | 4..204 | 990 | 99.5 | Plus |
| 2L | 23513712 | 2L | 18155415..18155529 | 437..551 | 575 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:46:13 has no hits.
FMO13430.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:58:52 Download gff for
FMO13430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15155-RA | 1..783 | 7..790 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:08:20 Download gff for
FMO13430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15155-RA | 5..796 | 1..790 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:28:05 Download gff for
FMO13430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15155-RA | 5..796 | 1..790 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:28:05 Download gff for
FMO13430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18154855..18155060 | 1..203 | 98 | -> | Plus |
| 2L | 18155120..18155352 | 204..436 | 100 | -> | Plus |
| 2L | 18155415..18155528 | 437..550 | 100 | -> | Plus |
| 2L | 18155591..18155826 | 551..787 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:08:20 Download gff for
FMO13430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18154855..18155060 | 1..203 | 98 | -> | Plus |
| arm_2L | 18155120..18155352 | 204..436 | 100 | -> | Plus |
| arm_2L | 18155415..18155528 | 437..550 | 100 | -> | Plus |
| arm_2L | 18155591..18155826 | 551..787 | 99 | -> | Plus |
