FMO13446.5prime Sequence
908 bp (903 high quality bases) assembled on 2013-02-11
> FMO13446.5prime
CAGTCGACATGAGAGTTCCGCCATGTGGATTCCATTTGTGTGTCATTTTG
GCCATAGTCGCGGAGATTAGAGGATTTTCGATGGAGGACAAGTGCAAATT
GTGGGCTGGAACTGGCTATATTGGTGATCCCAGTGATTGCCAGGCCTGGG
GATATTGCCAGGACAACAAACTCATCGATAGACGTAGCTGCACTGAAGGA
TTACTATACAGTTTCCGAGATGGCACCTGCAAGAGGGCATCCGATACGAT
TTGTCATTCCCAGCTCTCGGAGATTTGCGCCAGCCTCGAGCCTTGGAATT
ACGTGGCCAACCCAGCTGATTGTCGGAGATTCGTCAAGTGCGCGGATTTG
GATGATCCCACTTGGGGCGACTGTGGTGTGGGTCAGGTGTTTAGCAACAA
GAAGCAGACCTGCCTCGAGGAGGTTGCCGGCTGTCCACAGGATAATATCT
GCTCCCATATGAAAGATGGCTCCTTTGTGGGCGATCCCAAGAGCTGTCAA
ATCTACTATAAATGCCATAATGGATTTGGCACCATGTTTGAATTGCTCCG
TTGGGCGATACTTTAATCGCAAAACGGGTAATTGCCAATCCTGGATGCCG
CATTACTGTTCCAAGGATGATGAGGATAACATATTAACGCCACCATCCAC
GGACCATAATATCTGCTCCAAGTATTATCAACGGGATAGAGATGGAGTGC
AACTCCTGCCGGATCTGATGACCTGTTACGGATATTACTCCTGCACATCC
CAGTTTCGACGTGGGCAAGTGGAGCAGCTGTCCTTGGGGACTGCACTTTG
AGTGGCGGAACCAGCGGTGTGCTTCGCCGAAGATAATAGCTGCTTCTACG
ATCGCTGCGCCAATAGAAACCACTATGGTGGCCACCATTAACATGGTCTG
CTGGTAGT
FMO13446.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5897-RB | 1671 | CG5897-RB | 14..914 | 9..908 | 4225 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11888016..11888911 | 908..14 | 4080 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:46:21 has no hits.
FMO13446.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:58:55 Download gff for
FMO13446.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5897-RB | 14..914 | 9..908 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:08:27 Download gff for
FMO13446.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5897-RB | 14..914 | 9..908 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:28:09 Download gff for
FMO13446.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5897-RB | 14..914 | 9..908 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:28:09 Download gff for
FMO13446.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11888016..11888917 | 8..908 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:08:27 Download gff for
FMO13446.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11881116..11882017 | 8..908 | 97 | | Minus |
