FMO13453.5prime Sequence
1064 bp (1052 high quality bases) assembled on 2013-02-11
> FMO13453.5prime
CAGTCGACATGGGATCGATCGTGGCCACAGCAGCTATTCTTTTATTCTGC
GTCCTTTCGGGCGAAGCCTGTAGGTATTGTGTCCCTATGGAGAAGTGCTT
AATACTAAGTCGAAAACTAAATAGTTGCCCATTTAATCACGTCTGTTGTG
ACATTATCATAAAGAGTCCTTATATCCCTAGCGGACCGAATGAGGAATCC
GATTCTGAGTCTGCATCATCTTCTACAGAAGAGGAAAACATACCAACCTT
TATCTATTTTCCAACGAGACCAACAGTCTCAAGTGAGCCCCAAAACAATG
TTTCTACGGAACCTGATGTACCCATTACTTATTGGCCACTTAAAGGATCG
GGCGCCCCAACAAATGATGGTGCGCAAGCTGAGCAACCAAAGCCAACTGA
ACGGACACAGCCAGGAGGCAGGTGCAATACGACTGGTCTATATTCCTGGG
TGGTAGCCCTATTTTACGAAGAAGTTTACTTGACCGGCGGCTCACTAATT
AGTCCAAAAGTGATCCTAACGGCAGCCCACAACACAATGAACAAAATGAA
TGAAGATAGAATTGTGGTTAGGGCCGGCGAGTTTGTCATGAACACAACAA
ATGAACCCATTCAGTATGAGGAGCGCGTTGTTGAAAGGATTGTGAGACAT
GAAGGATTCATTTTTCAGTCGGGTATTAATAATGTGGCTCTTATTTTCGT
AAAAACACCGTTCGTGCTAAACGATCGCATTGGAGTATTGACGTTGCCAA
GCCGACAAGCGTCGTTCGAGGGACGTCGCTGTACGGTTGCCGGTTGGGAC
TTGGTGAGTTCCCATGATCAAAGCCGTATGAGAATTATAAAGAAATTAGA
GTTAACCGTGTTGGACAGAACGACATGCGTGGCTCAGTTTAGAAATACAC
TTTGGGCAGGAATTTGATCTTCATCCGAGTCTGATTTGCGCCCGAAGTGA
ATAAACCGGGATTTCTGCTTTGGCGTGGAGTATGCATTGTCTGCTCCCTC
GAGATGAAATCCACACGTCTTCGAGCAGGCTGGGATCGTCGCCTGGGGCA
TGGGGGTGGGGAAT
FMO13453.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:47:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18563-RB | 1251 | CG18563-RB | 18..1075 | 7..1055 | 5075 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:47:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17456846..17457694 | 1055..216 | 3830 | 98.9 | Minus |
| 2L | 23513712 | 2L | 17457870..17458027 | 164..7 | 790 | 100 | Minus |
| 2L | 23513712 | 2L | 17457756..17457808 | 215..163 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:47:09 has no hits.
FMO13453.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:59:16 Download gff for
FMO13453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18563-RB | 1..1063 | 9..1064 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:00 Download gff for
FMO13453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18563-RB | 11..1082 | 1..1064 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:28:37 Download gff for
FMO13453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18563-RB | 11..1082 | 1..1064 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:28:37 Download gff for
FMO13453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17456838..17457694 | 216..1064 | 98 | <- | Minus |
| 2L | 17457756..17457806 | 165..215 | 100 | <- | Minus |
| 2L | 17457870..17458030 | 1..164 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:00 Download gff for
FMO13453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17456838..17457694 | 216..1064 | 98 | <- | Minus |
| arm_2L | 17457756..17457806 | 165..215 | 100 | <- | Minus |
| arm_2L | 17457870..17458030 | 1..164 | 97 | | Minus |
