FMO13482.5prime Sequence
907 bp (907 high quality bases) assembled on 2013-02-11
> FMO13482.5prime
CAGTCGACATGGCTGCCACCGATATCGCCGAGGAGGCCTTTCACTTGCGC
CTGGGCTATCTGAAGCCGGAGACCGTGGAAATCGCCCGTGTGGAACTCCG
CGAAACCGAAGAAGTCAAGGCGGAGGCCATCATCAAGCTACGGGAACTGC
TCAAGGCCACGCCCGAGCTGAACTACAAGGATGACGACGCTTTCCTCACA
GTTTTCCTGCGCGCCTGCCACTTTTATCCCGAAGGAGCTCTGGAAAAGAT
GAAAACCACAGCCAGCTTCCGCAAGGAGTACGCCTCTCTGGTCCGCGGAC
TCCTGGTCGAGCAGGTTAAGGAGAAATTCGTGAAGGGCAGTGTGATCAAT
GTGCTCAAGAACTGCGACCAGAAGGGTCGTCGTGTGCTCATCGTGAACTG
TGGCAAACTCTGGGATCCCAGCGATATTACCAGCGATGAGATGTTCCGCA
TGCTCTACATGGTACATCTCGCCGCCCAGCTGGAGGAGGAGACCCAGGTG
CGGGGCGTGGTCTGCATCATGGACTTCGAGGGACTGTCGATGAAACAGGT
GAAGGCCCTGTCGCCGAGCTTCTCCAAGCGATTGCTCACATTCATCCAGG
AGGCGATGCCCCTTCGCATGAAGGAGGTGCACTTCGTGAAGCAGCCGTTC
ATCTTCAACATGGTTTGGTCGCTCTTCAAGCCCTTCGTCAAACAAAAGCT
GAACAATAGGATGCACTTCCACGGCAGTGACATGAAGTCGTTGCAGAAGT
TCCTCGACCCCTCCGTCCTGCCCGCCAACTACAAGGGTACTCTGCCCGCG
ATCGACTACGGTGGCGTCGAGTGGTTCCCCGCTCTGGAGCAGCAGCCCAG
TATGTGGAGGAGTGTAGCCAGCTTGGCCCTGCCCAGTGGGCAAGCTTTCT
AGACCAT
FMO13482.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:47:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5958-RA | 1174 | CG5958-RA | 147..1028 | 9..889 | 4370 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:47:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7431079..7431542 | 710..247 | 2320 | 100 | Minus |
| 2L | 23513712 | 2L | 7432937..7433176 | 248..9 | 1200 | 100 | Minus |
| 2L | 23513712 | 2L | 7430676..7430856 | 889..710 | 840 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:47:54 has no hits.
FMO13482.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:59:32 Download gff for
FMO13482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5958-RA | 107..992 | 1..889 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:32 Download gff for
FMO13482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5958-RA | 143..1028 | 1..889 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:29:00 Download gff for
FMO13482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5958-RA | 143..1028 | 1..889 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:29:00 Download gff for
FMO13482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7430677..7430855 | 711..888 | 98 | <- | Minus |
| 2L | 7431079..7431540 | 249..710 | 100 | <- | Minus |
| 2L | 7432937..7433180 | 1..248 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:32 Download gff for
FMO13482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7430677..7430855 | 711..888 | 98 | <- | Minus |
| arm_2L | 7431079..7431540 | 249..710 | 100 | <- | Minus |
| arm_2L | 7432937..7433180 | 1..248 | 98 | | Minus |
