FMO13483.5prime Sequence
782 bp (782 high quality bases) assembled on 2013-02-11
> FMO13483.5prime
CAGTCGACATGGGCGGTCAGGGCAAGGCGATCAATAGGAAGCGTAAGTTT
GTCGGTCGCAAGGCGGACGATCCGGAGTTCGATCTGGACAAGAAGCAATT
CAAGGTGCTCCATCTGAATGCCACCGAAAAGCGGCTGATCATCGTTTTGG
AAGGAGCCCAACTGGAGACGGTGAAGGTGCACAACACTTTCGAGCTGCTG
AACTGCGACGATCACGCGGGAATTATGCGCAAAAACCAAAGAGATCCCGG
CTCCTGTCGTCCGGACATCACCCACCAGTGCCTGTTGATGCTCTTCGATT
CGCCACTGAACCGGGCCGGTCTGCTTCAGGTCTTTGTGCGCACCGAGCAT
AATGTGCTTATCGAAATCAATCCCCAGACGCGCATCCCGAGGACATTTAA
ACGCTTTGCTGGCCTAATGGTGCAATTGCTGCACAAGTTCCAAATTCGCG
CCAATGACTCCTCACGTCGTCTGATGAGTGTCATTAAGAATCCGATTACG
GATCATGTGCCGGTCGGTTGCAAGAAGTACGCCATGAGCTTCTCTGGCAA
ACTATTGCCCAATTGCCGGGATCTGGTGCCACATGGTGACGAGACGTCGG
CCAGCTATGATGAGCCGGTGGTCATCGTTATTGGAGCCTTCGCACATGGC
GTTCTCAAAACGGACTACACGGAGGAGCTGTTCTCCATTAGCAACTATCC
ACTTTCGGCGGCCATCGCGTGCTCCAAAATCTGTTCCGCCTTCGAGGAGG
TTTGGGGCGTGGTAGCAAGCTTTCTAGACCAT
FMO13483.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:47:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3527-RA | 970 | CG3527-RA | 100..859 | 5..764 | 3785 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:47:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4552306..4552895 | 175..764 | 2950 | 100 | Plus |
| X | 23542271 | X | 4552072..4552246 | 5..179 | 860 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:47:56 has no hits.
FMO13483.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:59:33 Download gff for
FMO13483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3527-RA | 104..868 | 1..768 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:34 Download gff for
FMO13483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3527-RA | 104..868 | 1..768 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:29:01 Download gff for
FMO13483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3527-RA | 98..862 | 1..768 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:29:01 Download gff for
FMO13483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4552070..4552243 | 1..176 | 97 | -> | Plus |
| X | 4552308..4552898 | 177..768 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:34 Download gff for
FMO13483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4446103..4446276 | 1..176 | 97 | -> | Plus |
| arm_X | 4446341..4446931 | 177..768 | 99 | | Plus |
