FMO13491.5prime Sequence
1169 bp (1034 high quality bases) assembled on 2013-02-11
> FMO13491.5prime
CAGTCGACATGAATTGGCGTAGTTTTATTGTTACTTTAATAAACTGCATA
GTCTGGTCAATACAAGTTATTCAATTAAATGGTACTGGAATTAAAAACCT
AGGAAGAACAAGAGACTCTTTTAGAGCGGTACAAGTACCCCAACAGTTTT
ATGATGCTATCGAACAGTCAGATTTCAGTAAACATAGTTTACAAAATAAG
TTAGAGCATTTCCTTGAAAAACTTCAAAAAAACTTGACCATATCGGCAGT
ATTGAGTGACTCCGAAGATATTGTCACAAGTGAAAGAAACTATGTTTACA
AGATGCGAGAACTATCAACCTTCTTTTATGAAGCTTCTTTTTCTTTCGAA
CAATTTTCTTCTGATATCCAAACTTTTTATGAAACATCAAAAAATGCAAG
CTACGCACTTTTGTTTAAACTACGCCAAGTCCCAACAGGTCAACCAACTC
TAGTAAAGGCTTTACTCACAAACTATTTTGCGGAAATAGAATTCTTTCAT
GTGTTGTTTTCAGAAATTATCGATGATGCTATGGAATATAGTACTAAATC
CCTAAAATGGATTCAAGAACTATTTGTTTATTATGCTGATACTCAAAATA
ATATTCTAGAAAATTGGAAATTGAAGACAAATCTTGAATGCTGCAAACTT
TATGTCAACTTCTTACAGGATCAGTCCTCTCAGATTTTTAAATGCGCTAC
TGTGGATAATCTTAATATAATATACGATGTGTATTCCGTAACGAAGCTTA
ACATAAAATATATACTAAGGCAACTTGAGTTTCGCATCCAACGATTATTC
AATTGTTTATTGTATAACAGCCCTAACATACAATGTAAGCTTCTTAAAAG
AGCAGAGAAAGATCTTAAAACCTTATTTAGAAATCTCTCCGAGCTAGACA
TGTTCATCGATATAAAAACTAAAAAGGCAAGCAGCCGCATTAGATTTCGT
CGAGGAAACACATGGAACAGCATTCAAATTAAATTGGACCGAACCAGAAC
TACTGCCTTCCAATTGGCTTTCCCATAACTCAATGTCACAGAATCTAAAG
AATGCTTTTACTTTTTAGATAAAATAATGCAGCTTTCTAGAACATTCGTT
GGGCGCCGGGTCAGTATTGCCTAATCCTATCCATATCTATCTAATCCACT
AGCTAGGAATCTGGCCTGA
FMO13491.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:48:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG40298-RA | 1161 | CG40298-RA | 39..1112 | 9..1076 | 5100 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:48:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 23726867..23727940 | 9..1076 | 4940 | 98.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:48:46 has no hits.
FMO13491.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:59:50 Download gff for
FMO13491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40298-RA | 1..1080 | 9..1082 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:10:07 Download gff for
FMO13491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40298-RA | 33..1120 | 3..1084 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:29:28 Download gff for
FMO13491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40298-RA | 33..1120 | 3..1084 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:29:28 Download gff for
FMO13491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 23726861..23727948 | 3..1084 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:10:07 Download gff for
FMO13491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 23719961..23721048 | 3..1084 | 98 | | Plus |
