FMO13503.5prime Sequence
958 bp (958 high quality bases) assembled on 2013-02-11
> FMO13503.5prime
CAGTCGACATGTTCATCAAGTTGCTTCTAATTAGCCAGCTGCTGGCGCTG
AGTTACGCTCAGTTGTCGCTCGACGAGGCTAAAAAGCAAATCGATGCCTC
GCTTTACAGCGAAGAGGAGACTACCGATGATACGCATCTGCCGGAGCCCC
ACCTGCCCCCCCAATATCAGCCTCATCATCCCCACAAGAAGGTGACCACC
ACCACTCCCGAGCCGGAAACCACAACTCCAAAGCCAGAAACCACCACGAA
GCCCGCAATAGAGCAGGAGGGTGAGGCCACCGCTGCTCCCGATGACGGAC
TGGGTCAACTGGATGATGGCTTGCAACAAAACAATGATGGATCTGCGCTT
CCAGAGTCCACCACTCCGGAACCGGAAACCACGACCCCTACGACGACCAC
CACCACAACGCCAAAGCCCCATAAGCATGAGCCCCACTTTCATCCCCATT
CTTATCCGCATCCTCACCCCTATCCCTACCCCATTCAGTATCCCTACCCC
CATCCAGGAGTGATATTCTCTGCCGCGGGACCTAAGCTTACTCCTCCATC
GACCACACCGCCCACTGCCAAAGATGCGGACAAGGAATCGCCGGAGCTGT
CTGGATATCCCTCCTATCCGACCTTCAGATCACCGTACTCGCCCTACCAA
CCCCAGGTGTTCCCTCAGCCTCGTAACTGGCCCAGCTTCCCAGGATACGG
ACCTCCCAGTCCCGGTTTCGGATACCCCCACAACCACAATCACGATCACG
AAGAAGACTCCGGCGAAGATAAGCCCAAAGACAAGTCTGGTGAAAAGGAT
AAAGACGAGGATGTGGCTCTGAAGCCACCAGGATTTAGCTACCCGCAGTC
TATTTGATTCCCCGAAGACCAGTGATCTCTGTGCCCAGCTTTCCGCGTCC
AGGAGGCGGATATGGTTCGCCCTACGGCTACGGACTCTACGCAAGCTTTC
TAGACCAT
FMO13503.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:49:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16772-RB | 1030 | CG16772-RB | 47..979 | 9..940 | 4610 | 99.7 | Plus |
| CG16772-RA | 1095 | CG16772-RA | 47..979 | 9..940 | 4610 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:49:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19962824..19963728 | 37..940 | 4445 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:49:07 has no hits.
FMO13503.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:59:59 Download gff for
FMO13503.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16772-RA | 40..983 | 1..944 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:10:21 Download gff for
FMO13503.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16772-RA | 39..982 | 1..944 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:29:42 Download gff for
FMO13503.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16772-RA | 39..982 | 1..944 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:29:42 Download gff for
FMO13503.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19962826..19963731 | 39..944 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:10:21 Download gff for
FMO13503.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19962826..19963731 | 39..944 | 99 | | Plus |
