FMO13515.5prime Sequence
785 bp (785 high quality bases) assembled on 2013-02-11
> FMO13515.5prime
CAGTCGACATGTTGGAAATATTTAGGACGCCCTATGCGGACTCCAAACAG
CTGCCGTTGGCAACTGGACCCGGTCCCATCATAATTATCCTCATTGGATA
CCTTCTGGTAGTTTTTAAGGCCGGCAGGAAGTTCATGGAGCATCGAGAAC
CTTATAATCTGCGAAAAGTGCTTAAGTACTATAACATGTTCCAGATATTC
TACAATATAATGATGCTCCTGCCCGGATACTACTTCATGTTGGTATTCCA
ACCGTACAACTTTCGCTGCATGACTGTCCTGCAGCAGGATCATCCGCTGA
AGAACTGGGAGCGCTGCATCAGCTATGCTTACTACATAAACAAGATCGTT
GACCTGCTTGACACCGTGTTCTGCGTGCTGCGCAAGAAGTACTCGCAAAT
AACGTTTTTGCACGTTTTCCACCACGTCCTGATGCCATCCGCCGGATACT
TGATAATACGATTCTATGGCTACGGAGGTCAACTCTTCTTCCTGTGCTCC
TTCAATGTATTCGTTCATATCTTCATGTATGCCTATTACTATTCGGCCAT
CAAGGGCAATACGGTGCGTTGGAAGCGGTACTTGACCCTCATGCAAATGC
TGCAGTTCCTCCTCATGTTTGGCCATTGCGCCTTAACCGCCATGCAGCGG
CAGTGCACTGCATCGCAGGGAACCCTCTTTCTGGTCAGCTGCTCCGCGAC
CATCATGTTTATCATGTTCGCCAACTTTTATTTCCAGTGCTACCTGAGAC
CGAAGCATAAGGAGAACGCAAGCTTTCTAGACCAT
FMO13515.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:36:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31141-RA | 961 | CG31141-RA | 79..837 | 9..767 | 3795 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:36:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23923653..23924195 | 225..767 | 2715 | 100 | Plus |
| 3R | 32079331 | 3R | 23923378..23923594 | 9..225 | 1085 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:36:05 has no hits.
FMO13515.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:56:38 Download gff for
FMO13515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31141-RA | 74..845 | 1..775 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:01:43 Download gff for
FMO13515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31141-RA | 74..845 | 1..775 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:18 Download gff for
FMO13515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31141-RA | 74..845 | 1..775 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:18 Download gff for
FMO13515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23923373..23923593 | 1..224 | 98 | -> | Plus |
| 3R | 23923653..23924203 | 225..775 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:01:43 Download gff for
FMO13515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19749095..19749315 | 1..224 | 98 | -> | Plus |
| arm_3R | 19749375..19749925 | 225..775 | 99 | | Plus |
