FMO13517.5prime Sequence
782 bp (782 high quality bases) assembled on 2013-02-11
> FMO13517.5prime
CAGTCGACATGGCCAGCAACTTCACCCAGTCCCAGCCGTCCAGGATCACC
AGCTACATGGTCAACCAGCTGCAGCCGACGGCGCAGGAAACGAAGTTGGC
GCTGATTCCCAGTGCACCCCAGTGGCGCTCCCCCCAGCTGATGGTCGTCT
TCGAGGACGGTGATCTGCACTCAGCGCGCCACCAGTTGCTCCAGTCCCTG
CAGAATCCCTTTGCCGAGGGATCGGTGGCCACGTTGCTACTCCAGGAGAG
CATTGCCGATCAGTTTGTGGGCCTAGTGGCGCAGGATTTGCGTCCGTTGT
CGCAGGAGGTGTCCAAGCATCCGAGCTACACCAGCACGCTGGCCAAGATC
GAAGAGCTGAAGGCCAAGACAGTACAAGGCGAAAGCCTTAAGGCTGGGGA
ATCACCCGTCTTGGTGTACGACTGCGTGCACAGCTATCTGGGCAATGGAG
CGACGGGAGTGGTGACGGTGCACACATTCCGCACAGCCAAGGAGGCCGGC
CAGTTGGCCAAAAGGGATCCCCTACCTTACGGCCAAGTTAGTCTGTGGAA
TGAGAAGCTGGGCTGCGCCTACGAACTGATACCACGACTACCGAGCGATA
TTGTGGCCATTAATTGCTTCAATCCGGACTTGGATCCCATCTGGGAATCC
TTTGCTGCCGACCGCAACGATGTTCTGCTGGCCAAGAACTATCACTATGA
ATCGCTGGTGGTGAGCGGCAAACGGAGGATCGTCGTCTTTCCCGTGGGCA
CCATCTTCGGCAACGCAAGCTTTCTAGACCAT
FMO13517.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:36:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MFS10-RC | 3329 | CG4330-RC | 84..840 | 8..764 | 3785 | 100 | Plus |
| CG15717-RE | 1150 | CG15717-RE | 78..834 | 8..764 | 3785 | 100 | Plus |
| CG15717-RC | 3329 | CG15717-RC | 84..840 | 8..764 | 3785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:36:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13129304..13129974 | 94..764 | 3355 | 100 | Plus |
| X | 23542271 | X | 13129101..13129188 | 8..95 | 440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:36:14 has no hits.
FMO13517.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:56:40 Download gff for
FMO13517.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15717-RA | 77..843 | 1..769 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:01:49 Download gff for
FMO13517.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15717-RA | 79..845 | 1..769 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:24 Download gff for
FMO13517.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15717-RC | 79..845 | 1..769 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:24 Download gff for
FMO13517.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13129096..13129188 | 1..95 | 96 | -> | Plus |
| X | 13129306..13129979 | 96..769 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:01:49 Download gff for
FMO13517.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13023129..13023221 | 1..95 | 96 | -> | Plus |
| arm_X | 13023339..13024012 | 96..769 | 99 | | Plus |
