FMO13518.5prime Sequence
359 bp (359 high quality bases) assembled on 2013-02-11
> FMO13518.5prime
CAGTCGACATGGTGGCCGTTAAGAAACAAAAGAAGGCTCTGGAGAGCACC
AACGCCCGTCTGGCGCTGGTGATGAAGTCCGGCAAATACTGCCTGGGCTA
CAAGCAGACCTTGAAGACCCTGCGCCAGGGCAAGGCCAAACTGGTGCTCA
TCGCCAGCAACACGCCCGCCCTGAGGAAGTCCGAGATCGAGTACTACGCT
ATGCTGGCCAAGACTGAAGTCCAGCACTACAGCGGCACCAACATCGAGCT
GGGCACCGCCTGTGGTAAATACTTCCGCGTGTGCACCCTGTCCATCACCG
ATCCTGGAGATTCGGACATCATCCGCTCGCTGGAGACGGCCGCAAGCTTT
CTAGACCAT
FMO13518.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:36:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL30-RE | 735 | CG10652-RE | 54..388 | 7..341 | 1675 | 100 | Plus |
RpL30-RB | 477 | CG10652-RB | 54..388 | 7..341 | 1675 | 100 | Plus |
RpL30-RC | 602 | CG10652-RC | 123..457 | 7..341 | 1675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:36:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19008948..19009117 | 176..7 | 850 | 100 | Minus |
2L | 23513712 | 2L | 19008378..19008545 | 341..174 | 840 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:36:20 has no hits.
FMO13518.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:56:41 Download gff for
FMO13518.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL30-RC | 84..432 | 1..350 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:01:53 Download gff for
FMO13518.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL30-RC | 48..396 | 1..350 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:28 Download gff for
FMO13518.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL30-RC | 117..465 | 1..350 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:28 Download gff for
FMO13518.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19008369..19008543 | 176..350 | 97 | <- | Minus |
2L | 19008949..19009121 | 1..175 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:01:53 Download gff for
FMO13518.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19008949..19009121 | 1..175 | 98 | | Minus |
arm_2L | 19008369..19008543 | 176..350 | 97 | <- | Minus |