FMO13520.5prime Sequence
1147 bp (1038 high quality bases) assembled on 2013-02-11
> FMO13520.5prime
CAGTCGACATGCGATTTGCCTTCGATTCTAATCATTCGCAATCGGGGGCG
CCATTCAAAGGCAGCAGGTGTTTCTTTAATTGTCAATGCATCTGCTGTCG
CCAAGGATGCTGCGTTGTGGTTGTAAAGTGCTGTTGCTGCTTTAACTTAA
ACTGCTGCAACAGCCTTGGCTCCCGGAAGTCATTTCCACAACCCGCTGCA
ATGCGTAAAAAAGTTGCTGACCTCGAAGTCCTTAGAGTATCAAGGTTTGT
GGCGGTTATTTTAGTGCTGGCTCGGTGGGTTACTGCGGTAGCGACACTCC
TGACAAGCTGCATACTCCTAGACATATTTTCCGTGCCTGGCCAGTCTGGA
GTTGCAGATAGAAGCCAAGCCAGCAGTAGGACAGTGCACGTCTCGGTTCC
TACCACACCTAATGAAACTCCCAGTAGCACTTCGGAGACGAAGCTAAAGT
TGCTTTATGGGTATACATCGTATGACATAAATAACGACCAACAGGTAAAG
TCCAACAATTTATGTAGAGTGCTTTGTAAAAGTCGCAATCGTAAACGACA
GCGAAGGAGGCGACGCCGACGCAATCACAGACGACGCAGGCACAGATATA
CTAAGCGACTTCATCATCTAATGCAAGATAATATGAGCGGCTTTGAGCAA
AGACTTAATTTTAGCGATGCCAAATGCCAGTCTTTGGAGACAAATTACGG
AACTAATTATGACTTAGTACAAGGAGGTAAACTATTTAGTCAGTCAGAGA
GAAGCCTACTGGTGTCCCCTTTGAGGGAAATTGAAGCACCTTGGCCAGCG
ATTCATGGTTCAATGCGTAACTGTTCAAAGATTAAACGCAATAGAGCCAA
TCTTATTTGGCTTCTAATTGGACTCGTCTGGTTTGAAGTCAAACTTATAA
ATTGCAATGGGATCAGCAGTAGTAATTATTATGCTTCGAATTTGGAGAGT
CACAGGGCTGCACCTTGTGCCATGAAAGCGGAAAGCCCAACATTATACAC
CGATTAAGATAATCCACCACACAGACTACAACATCCTACCACAAATACCA
TTCAACAATAATTTCAACAAAAAAACTATCCAGCCTTACAACATTGCACC
CAGCGATGGAGTTCGTTTGGGAGTCATAACGGCAATTGACAAAGCCT
FMO13520.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:36:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Actbeta-RA | 3671 | CG11062-RA | 331..1474 | 9..1145 | 5315 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:36:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 1082127..1083126 | 1008..9 | 4890 | 99.7 | Minus |
| 4 | 1348131 | 4 | 1081094..1081209 | 1120..1007 | 270 | 89.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:36:32 has no hits.
FMO13520.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:56:44 Download gff for
FMO13520.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Actbeta-RA | 327..1457 | 9..1135 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:01 Download gff for
FMO13520.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Actbeta-RA | 331..1461 | 9..1135 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:36 Download gff for
FMO13520.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Actbeta-RA | 331..1461 | 9..1135 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:36 Download gff for
FMO13520.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 1082127..1083126 | 9..1008 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:01 Download gff for
FMO13520.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 1102753..1103752 | 9..1008 | 99 | | Minus |
