FMO13521.5prime Sequence
662 bp (662 high quality bases) assembled on 2013-02-11
> FMO13521.5prime
CAGTCGACATGTTCAACAATATTTTCGGAAAGAAACCCACCGTGAAGGAG
CAGCAGCGGGAGAATGACCGATCGCTGCGCAAGGCCACCAGGGACATCGA
ACGGGAGCGCAGGAAAATGGAGGAGGAGGAGCGCAAGCTGGAGCTGGAGA
TCCGACGGAATGCCGCCGCTGGGAACAACGATGCCTGCCGCATTCTGGCC
AAGCAGCTGGTGGAGATCAGGAAGCAGAAATCACGCACATACGCAGCAGC
GGGCAAGATTCAGTCCATTGGCTACCAGAACAAGAACATGGGCGCCAATA
TCGCCCTAAGCGAAGCCATGGGCACCACGGCCAAGACGATGGGTGAAATG
AATAAGGTGATGCGACCGGAGGCCATCGGGGAAACAGTGCGCCAGTTCCA
GGCGGCCAACATGAAGATGGAAATGACCGACGAGATGATCAACGACACGC
TGGACGACATGCTGAATGAGTCCGGCGACGAGGAGGAGTCCAATGCCGTA
GTCAACAAGGTGCTCGACGAGATCGGCATCGAGATCTCCGGCAAGATGTC
CAGCATCCCGGCCACGGGATCCTCAGACTTTGAGACGAGTGGCAAGCGCA
CCGAGAAGGACATTGCCGATCAACTGGCCAAGCTGCGCTCCTCTGCAAGC
TTTCTAGACCAT
FMO13521.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:36:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CHMP2B-RA | 855 | CG4618-RA | 127..762 | 9..644 | 3180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:36:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5139745..5140380 | 9..644 | 3180 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:36:39 has no hits.
FMO13521.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:56:45 Download gff for
FMO13521.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CHMP2B-RA | 73..708 | 9..644 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:05 Download gff for
FMO13521.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CHMP2B-RA | 127..762 | 9..644 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:41 Download gff for
FMO13521.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CHMP2B-RA | 127..762 | 9..644 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:41 Download gff for
FMO13521.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5139745..5140380 | 9..644 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:05 Download gff for
FMO13521.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5132845..5133480 | 9..644 | 100 | | Plus |
