FMO13526.5prime Sequence
848 bp (848 high quality bases) assembled on 2013-02-11
> FMO13526.5prime
CAGTCGACATGATATGCCGCCTGTGCCTGGACGATGCTGAGCACAGTGTG
CCAATCTTTGACCAGGATGACTCCGGCGATCAGCCAGTGCCCTCCAATCT
AGCGGAGCTAATTGAGAAACACCTGCAGTTGGTGCTCCTGCCCAACGATG
GGGTGTCCAAGAGCCTCTGCACCCAGTGCTGGCAGCAGTTGGCCGACTTC
GAGCAGTTCTGCGCCATGGTGATGAAGAAACAATTGGGCCTGCAGCAACT
GAAGATGGAGCCGTTCTCCGAGGACGAGGATGCGGACACTAAGGCGCAGA
TCCTGTGCGAACCGGAGATCGATGTGAGTCCCGCGGCCGCCGACAACGAA
GAGTGCAACGAGATCGACGGCGATGCCAGCAGCAACAGCAGAAGCAGTAG
CATTCGCACCACATCGCTACGAGAAATGCGCCTGCCGTCGCCCATTAGAC
GCCGTATGCGTCTACCCCGGGCAGTCACAGCACCCAAAACTCAGGCTGTC
AAGGCCAAGGCCAGGACGAAGACCCACAAGGCCGAGGCGGACGAGGATGA
GGATGCCGAAGGCGAGGGCGATCCAGAGAGCCGCAGCAGCAATAGCCGCG
AAATGGACAGCTATATCGCTCTGCACGGTCGTTTGGAGTGCTGCATTTGC
GGCGGCGACGAACAGTTTCCCAATTTCGCCGAGATGAAGCGGCACTTCCG
GAATCATCACCAGTCCCTCGGTTATGTGGTCTGCTGCCAGCGGCGCTACA
AGAAGCGTGCCCTCTACGTGGACCACCTGCACATGCACAACGATCCGAAT
TACTTTAGGTACTTGACCAGCCCAGGCAATGCAAGCTTTCTAGACCAT
FMO13526.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:36:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11695-RB | 1800 | CG11695-RB | 71..892 | 9..830 | 4110 | 100 | Plus |
| CG11695-RA | 1742 | CG11695-RA | 71..872 | 9..810 | 4010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:36:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11577144..11577840 | 134..830 | 3485 | 100 | Plus |
| X | 23542271 | X | 11576953..11577078 | 9..134 | 630 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 18:36:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1512..1564 | 350..402 | 112 | 67.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2273..2383 | 292..402 | 112 | 61.4 | Plus |
FMO13526.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:56:47 Download gff for
FMO13526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11695-RB | 64..892 | 1..830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:17 Download gff for
FMO13526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11695-RB | 64..892 | 1..830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:48 Download gff for
FMO13526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11695-RB | 64..892 | 1..830 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:48 Download gff for
FMO13526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11576946..11577078 | 1..134 | 97 | -> | Plus |
| X | 11577145..11577840 | 135..830 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:17 Download gff for
FMO13526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11470979..11471111 | 1..134 | 97 | -> | Plus |
| arm_X | 11471178..11471873 | 135..830 | 100 | | Plus |
