FMO13529.5prime Sequence
1143 bp (1044 high quality bases) assembled on 2013-02-11
> FMO13529.5prime
CAGTCGACATGCATACCGTGGAAGACATGTTGGTGGAGAAAAACTACAGC
AAGTGCCCGCTAAAAAAGCGCCCAGTTAATTACCAGTTCGAGGCGCCTCA
AAATCACAGTAACACCCCAAATGAGCCGCAGGATTTGTGCGTAAAGAAAA
TGGAAATTCTGGAGGAAAATCCCTCCGAGGAACTGATCAACGTCAGCGAT
TGTTGCGAGGACGAGGGTGTGGATGTAGATCATACAGATGATGAACACAT
CGAGGAGGAGGACGAGGACGTCGATGTGGATGTGGACTCGGACCCAAATC
AGACCCAGGCTGCGGCTTTAGCTGCTGCCGCAGCTGTGGCCGCCGCTGCA
GCCGCCTCCGTGGTTGTGCCCACGCCCACATACCCGAAATATCCCTGGAA
CAACTTCCACATGTCGCCCTACACCGCCGAGTTCTACAGGACCATCAATC
AGCAGGGTCATCAGATTTTGCCGCTGCGTGGCGATCTCATTGCGCCCAGT
TCGCCGAGTGACTCGCTGGGCTCCCTGTCGCCGCCACCACATCATTACCT
TCATGGTCGCGCAAGCTCCGTTTCCCCGCCCATGAGATCTGAAATCATCC
ATAGACCAATCGGCGTGCGGCAGCACCGTTTCCTGCCCTATCCACAGATG
CCCGGTTATCCGAGCTTGGGCGGCTATACCCATACCCATCATCACCATGC
GCCTATCTCGCCGGCTTATTCCGAGAATTCCTACTACTCCATGCGATCGA
TGACGCCTGAATCCAGCTGCAGCTCCTCGCTGCCCGAGGATCTATCCCTG
AAACACAAGAACCTGAACTTGAATCTAAACACTAGCCAGCCGGGAGAGCA
AGCAGCAGCCAAACCGGGGATATGTCGCCCGAAACTATGCCGAATGCCTC
CGCCAAGAAGGACAAGAACCAGCCGCCGCGTTACAGTGCCCGGATTGCCA
GAAATCTTACTCCACTTCTCGGCTGACAAACATCAGCAGTTCCATTGCCG
GCGCCGAGGGTAATCAAGGTGAAGAAGTCTTCAGCTGCAAGATTGGTGAC
AAGAACCTTATGTTTTCGTTGGGGTGCCTCAGAATGCCAAATTCCGCACC
CCACACGTTTGCTGCAGTGCAATCTGGTGGCGCAAAGCCCTTC
FMO13529.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:37:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| esg-RA | 2273 | CG3758-RA | 229..1350 | 9..1126 | 5040 | 97.6 | Plus |
| wor-RA | 2222 | CG4158-RA | 1240..1300 | 984..1042 | 180 | 90.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:37:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15334094..15335147 | 9..1054 | 4785 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:37:15 has no hits.
FMO13529.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:56:50 Download gff for
FMO13529.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| esg-RA | 224..1314 | 1..1087 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:30 Download gff for
FMO13529.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| esg-RA | 222..1312 | 1..1087 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:00 Download gff for
FMO13529.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| esg-RA | 222..1312 | 1..1087 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:00 Download gff for
FMO13529.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15334087..15335177 | 1..1087 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:30 Download gff for
FMO13529.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15334087..15335177 | 1..1087 | 97 | | Plus |
