FMO13530.5prime Sequence
1146 bp (1029 high quality bases) assembled on 2013-02-11
> FMO13530.5prime
CAGTCGACATGAGCCTGAAGTCCAGTGCTAGGATCAAAAAACGCCGCTCG
GAGGCAGCGGCGGCCACCTATCCGGTACCATCAGCTCCGGCTCAAACGGT
GAGCAACGGCTCAGCTGCCACAGCGAATCCTGCGAGTGCCACGAGCACTC
CAGGAAATGGTGCCACAAATCCTTGCCAGAGCTCGTCCAAGAAACAAAGC
TTCGTGGGACGCAATCCCAACTTCGATACCGATGAAACCAAGCTGCTCAT
CCAGTTGTGGGGCGATCCCAAACTGCAGAGAACCCTAATCACCACGCACA
AAAAGCACGCCGTGATCTGTCAACTGGCCGCCAAGATGCAGGAGTATGGC
TACCATCGTTCGCCAGAGGAGATTACTACACGGATTAAGAACCTCAAGTG
CTTCTACAATCGCTTGAAGAAGGACAAGGAGTGCGGCGGTCAGTCCACCG
ATTCGGAGCCCAGCTGGAAACACTTTGCCGAGATGGACGCCATTATGACC
AGACCCATTTTCAGTGTGCGTCCCAATGAGGTGCCTGCTCCATCGCTCAA
ATACCAACTGGAGCAGGCCCTGGAGGAGCATGCCGAACGACGCAAGCGGC
GGCTGGCGAACGGAGAGGAGCTATCCGAAAGCGACAACGAGGAGGATGAT
ATGCTGCTCTCCGCTCTGGTCAGCAAAAACAAGGATACTGGCGGCCGAAA
GGAACTGGAAGCTGGCTGCCTAGAAGCCGACAGCGATATGAACGAGGAAT
CCTTCTCAAAGCGTCGCAAGGTGTCCGCTGATGTAGAGGTTGATATAGGA
GAAGCACTGACTTCGCCGTGCATCAAAATCGAGCCAGGCCAGGAAGTTGA
AACAGCAGCAGCAACTTCCACCGTAGAGCCCCAACAGGAGGAGGAGGACG
ATGACTGCATGATTCTGCCACAGCCCAAGAGACCCATCGATGTGATGCCG
CTGATGATCCACCAATTGAGAAGTCATCAAGTTCCACTACTAATACATCC
ACTTTGGCTGACATGTTACAGGGTTAACAAACGTTCGAATCTTGCTTCTT
TCACCGGGGTCATTGTTCATCATTTCGCAGCATTACACGAACTACGCTGC
CAGCGCGACCACGCAAGTTCACCGACACGTCTAGCAACTTCAAGGC
FMO13530.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:37:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10151-RD | 2389 | CG10151-RD | 211..1360 | 8..1146 | 5215 | 97.7 | Plus |
| CG10151-RC | 2223 | CG10151-RC | 81..1230 | 8..1146 | 5215 | 97.7 | Plus |
| CG10151-RB | 2353 | CG10151-RB | 211..1360 | 8..1146 | 5215 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:37:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14754514..14755575 | 1066..8 | 4985 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:37:22 has no hits.
FMO13530.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:56:51 Download gff for
FMO13530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10151-RB | 314..1470 | 1..1146 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:34 Download gff for
FMO13530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10151-RB | 314..1470 | 1..1146 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:02 Download gff for
FMO13530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10151-RB | 204..1360 | 1..1146 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:02 Download gff for
FMO13530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14754426..14755581 | 1..1146 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:34 Download gff for
FMO13530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10641931..10643086 | 1..1146 | 97 | | Minus |
