FMO13604.5prime Sequence
303 bp (230 high quality bases) assembled on 2013-08-23
> FMO13604.5prime
TCAGTCGACATGATTATTTCCAAGGATCTTTTCATATTTGGCGAACAAAT
TTTTGCAACAATCATACCAGAAGGTGGAGCCGCGGCGCTGGCAACCCAGC
AGCAACATCAGCAGCAGCATCAGCAGCAGCATCAGCAGTCGCATCAGCAG
CCGCATCAGCAGTCGCAGCAGCAGCAGCAGCAACAACAGCCGGCAATTAT
AAATTCACAACGACGACGGCCACTTCGTTGGTAATAACTCGACAGCAGGA
GCAGCTGACAAGTGTAGAGAGCATTAAAGTAGAGCAGCAGCAGAGCAGCA
CAC
FMO13604.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:36:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| E23-RE | 5149 | CG3327-RE | 1314..1613 | 10..300 | 1275 | 97 | Plus |
| E23-RD | 4397 | CG3327-RD | 562..861 | 10..300 | 1275 | 97 | Plus |
| E23-RC | 4514 | CG3327-RC | 679..978 | 10..300 | 1275 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:36:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3353142..3353392 | 258..10 | 1155 | 99.2 | Minus |
| 2L | 23513712 | 2L | 1135003..1135076 | 121..194 | 190 | 83.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:36:30 has no hits.
FMO13604.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 10:09:22 Download gff for
FMO13604.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E23-RC | 673..958 | 4..282 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:18:46 Download gff for
FMO13604.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E23-RC | 673..958 | 4..282 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:18:46 Download gff for
FMO13604.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3353108..3353398 | 4..287 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 10:09:22 Download gff for
FMO13604.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3353108..3353398 | 4..287 | 95 | | Minus |
