FMO13607.5prime Sequence
1027 bp (921 high quality bases) assembled on 2013-08-23
> FMO13607.5prime
TCAGTCGACATGAGCTCCTCGAATGCGGGACAGCGCACGAAGCTAATTCA
GGAGAAGTGCCAGACCCTCCTGACGCAGATGCTCCGCGACGAGGACAACA
AGTACTGCGTGGACTGCGATGCCAAGGGTCCGCGCTGGGCCTCCTGGAAC
CTGGGCATGTTTCTCTGCATCCGCTGCGCCGGCATCCATCGCAATCTGGG
CGTGCACATATCGCGCGTCAAGTCCGTCAACCTGGACACTTGGACGCCAG
AGCAGGTGATCTCGCTGCAGCAGATGGGAAACTCGCGGGCTCGCGCCGTC
TACGAGGCGCAGCTGCCGGACGGCTTCCGTCGCCCGCAGACGGACACAGC
GCTGGAGAATTTCATCCGGGCCAAGTACGAGCACAAGAAGTACCTGGCCC
GCGAGTGGGTGCCTCCCTCGCCGCCGAAAGTGGACTGGGCCAAGGAGATC
GACGAGGAGCTTGAGCGCCAGAAGCGCAAGAAGAAGAGCACGCAGGCCCA
GGCCACTTTGGGCCTGGCTGGAGTGGCCGGTGGCAGCGGCGACAAGCGCC
TGTCCGGGTCATCTGCGTCGGCGCTCAAGAACACCCCCCTGCCCGCGCCG
CTTCCAAAGCCGAAACCCAACCAGGTCGGCGGCTGCAGCCCAAAGACGAC
GCAACGCGTCCAGCTGAACAGCAGCGGCGTTAGCAGTGCCGGCGAAAGCG
ACCTCTTGGGACTGTCCTCGCCCACCAAGCCCATTGTCGCGACCAATGCC
AGCCCAGACCTGCAAAACGAAGTTTCACCAGCTTTCTCAGCGCCGAATCG
ATTGCCGGCCAGCCGGATAGCCGATTGGCAGCAACGGCGACGCCGCCAAT
TTGATGGCTCGAAGCCGACTCGCTGGGACAAGAGGAGCAGACTTCTTCAC
CCAGGCTCACTGGGGCGCCTGGCGGCACGAGAAGATCAGTTCTGGCCAAG
ATGTCAGGAAGCATTCTTGGCGGCTGTACGGCACGCGGCTCAGCCATCCC
ACAACCCCCCAGATGATACTTTGCGCG
FMO13607.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:36:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8243-RA | 2410 | CG8243-RA | 214..1228 | 10..1023 | 4520 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:36:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8923267..8924050 | 127..905 | 3625 | 99 | Plus |
| 2R | 25286936 | 2R | 8922998..8923117 | 10..129 | 600 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:36:38 has no hits.
FMO13607.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 10:09:27 Download gff for
FMO13607.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8243-RA | 214..1098 | 10..890 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:18:51 Download gff for
FMO13607.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8243-RA | 214..1098 | 10..890 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:18:51 Download gff for
FMO13607.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8922998..8923115 | 10..127 | 100 | -> | Plus |
| 2R | 8923268..8924034 | 128..890 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 10:09:27 Download gff for
FMO13607.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4810503..4810620 | 10..127 | 100 | -> | Plus |
| arm_2R | 4810773..4811539 | 128..890 | 99 | == | Plus |
