FMO13610.5prime Sequence
758 bp (453 high quality bases) assembled on 2013-08-23
> FMO13610.5prime
TCAGTCGACATGACGGTGGATCTATCGCCAGTGCAGGAATACTATAAGGA
TAAGACGATATTCATCACTGGAGCGTCTGGGTTCATGGGCAAGGTTCTGC
TGGAGAAGTTGCTCTACTCCTGCCACTCCCTCAAGGAGGTGATCATCATC
TGCCGCCCGAAGCGCGGCAAGGCACCCGAGACGCGTCTCGAGGAGATGTT
CAAGCTGCCCATCTTCCAGCGCATCAAGGACGAGCGCCCGGAGATGCTCA
AGAGGGTTACCATCTACCAGGGCGACGTCACCTTCGACCAGCTCGGGCTC
AGCGGGGAGAGCTTGAAGCACGTGACCGAGAACACTAACATTGTTTTCCA
CATGGCGGCCACCCTTAAGCTGGAGGGCACCTTCGGGACGCCATCGATAT
GAACTTGCTAGGCACCCGGCGAGCGCTCACGTGCCAGGAAATGAGCAGCT
GGAGTCTTCATCCACTTGTCACGCTTTTGCACTGCGACAGGATGTGATGT
ATGAGAGTGTACGAGTTCCCACAGCGGAGATCTATGCGCTGGCGATGGAT
GACGTGAAGACCTGACGCATACGCGATTGCTAAGCCGCACCCAACACATA
CACTACTCAAGCGTCTGCGAGCTCTGTGCCGACACTACGAGTCATGCCGT
CATCATCGCCGTCCAGCATCGTACTCAGCTGCCCTGAGCTCTGCAGTAGT
GACATATGACGACTACGAGTCTCATGCCCGCAAGATATCGATCAGACTGA
CGGAGTAA
FMO13610.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:36:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30427-RG | 1785 | CG30427-RG | 112..844 | 10..694 | 2460 | 93 | Plus |
| CG30427-RC | 1852 | CG30427-RC | 179..911 | 10..694 | 2460 | 93 | Plus |
| CG30427-RF | 1739 | CG30427-RF | 112..818 | 10..672 | 2445 | 93.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:36:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24934552..24934831 | 289..10 | 1400 | 100 | Minus |
| 2R | 25286936 | 2R | 24934343..24934483 | 429..290 | 655 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:36:14 has no hits.
FMO13610.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 10:09:15 Download gff for
FMO13610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30427-RC | 173..896 | 3..681 | 92 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:18:36 Download gff for
FMO13610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30427-RC | 173..896 | 3..681 | 92 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:18:36 Download gff for
FMO13610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24934552..24934838 | 2..289 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 10:09:15 Download gff for
FMO13610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20822075..20822361 | 2..289 | 98 | | Minus |
