Clone FMO13615 Report

Search the DGRC for FMO13615

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:136
Well:15
Vector:pMK33-CFH-BD
Associated Gene/TranscriptGckIII-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO13615.5prime Sequence

303 bp (249 high quality bases) assembled on 2013-08-23

> FMO13615.5prime
TCAGTCGACATGTCCTGGACGGAGAAAGTCGATCCAGAGCTCATCTTCAC
CAAGCAGGAGCGCATCGGCAAGGGCTCCTTCGGCGAGGTGTTCAAGGGCA
TCGACAACCGCACCCAGCAAGTGGTGGCCATCAAGATCATCGATCTGGAG
GAGGCCGAAGATGAGATCGACGACATCCAGCAGGAGATCATGGTGCTGTC
GCAGTGCGACTCGCCGTACGTGACGAAGTACTATGGCAGCTTTCTTAAGG
CACAAGTTATGGATCATCATGGAGTACTGGCGTGGATCGCTTGACCTCAT
GAG

FMO13615.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:36:59
Subject Length Description Subject Range Query Range Score Percent Strand
GckIII-RA 2476 CG5169-RA 284..586 8..302 1315 97.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:36:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17085796..17086067 8..277 1265 98.5 Plus
Blast to na_te.dros performed on 2014-11-28 23:36:58 has no hits.

FMO13615.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 10:09:38 Download gff for FMO13615.5prime
Subject Subject Range Query Range Percent Splice Strand
GckIII-RA 278..576 1..293 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:19:03 Download gff for FMO13615.5prime
Subject Subject Range Query Range Percent Splice Strand
GckIII-RA 278..576 1..293 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:19:03 Download gff for FMO13615.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 17085790..17086088 1..293 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 10:09:38 Download gff for FMO13615.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12911512..12911810 1..293 96   Plus