FMO13617.5prime Sequence
551 bp (351 high quality bases) assembled on 2013-08-23
> FMO13617.5prime
TCAGTCGACATGTGCTGCAAGTGCTGCGGGGAAACTCAACGAAAGGTCTG
GGTCTTCGGCTTGGGATCGGTTTTCCTTTTGCTGGGAATACTAATCGTGG
TCTTCTGGCCGGGTATTGCAGATAACCTTGTAGAGGATGGCCTTACCCTC
AAGCCCGGGACTGATGCCTATGAAAGCTGGCTGGAGGCACCTATCCCCAT
TTACCTGAGCTTTTACATGTTCATTGGACGAATCCCGAGGACATAAGGAA
CCCGGACATTAAGCCAAACTTCGTGGAATGGGTCCGTACACCTTCCTGGA
AAAGCACAGATGAGACTATACGTTTTACGATATGCAACGGTGCATATTAT
GAGCGCCGCCATGTTTTTGATCCGGAGAGATCCATGCACATTGACGACTG
TGACTGCTGCCATGCATACCGCCCGTACCGATGAATGGAGACAGGCAGAT
CGTCAAAATCTTACTTTATGCTGACATGAGCGAAGTGACGTACAGCCGTG
GCGATGATCTTCAGGTACAAGATACTACGATTCTAACTGTCAACCAAAAT
C
FMO13617.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:37:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| crq-RC | 1938 | CG4280-RC | 157..574 | 9..411 | 1700 | 96.2 | Plus |
| crq-RE | 2714 | CG4280-RE | 471..888 | 9..411 | 1700 | 96.2 | Plus |
| crq-RD | 2041 | CG4280-RD | 260..677 | 9..411 | 1700 | 96.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:37:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 450285..450540 | 384..139 | 805 | 94.9 | Minus |
| 2L | 23513712 | 2L | 450665..450795 | 139..9 | 655 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:37:04 has no hits.
FMO13617.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 10:09:42 Download gff for
FMO13617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| crq-RD | 253..763 | 1..479 | 92 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:19:08 Download gff for
FMO13617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| crq-RD | 253..763 | 1..479 | 92 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:19:08 Download gff for
FMO13617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 450666..450802 | 1..138 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 10:09:42 Download gff for
FMO13617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 450666..450802 | 1..138 | 97 | | Minus |
