FMO13626.5prime Sequence
790 bp (458 high quality bases) assembled on 2013-08-23
> FMO13626.5prime
TCAGTCGACATGTTTTTAGAATCGCATTTTTACTTGGTCCGTCTGCCTTG
TAAATATTGTGCTGGCCATATCCGGGGATCTTCGTTTGATCCCTCGCTAC
CTGCGGAAGTCCTCCTCCGCTCTGATCTCTTCCTACCTGCCAATCTCTGC
TATAAAAGCGGATGCTGGCCAAAAGTGGCCATCAGTCTACTACAAGTATT
CGTGTTCAACACACAACTCTGCGCTCAGAACGAAGACAAAATGTTTGAGA
ATTTTGAGTTCACCAACGAGAATCTATCGGCACAGACCATGGATCTGGAC
ATCGATCTCATCAGTTTGGACGGTGCCCAGCACTCCGACTTCCACTACTT
TTACGGATAACTTTAATTTTGCTCAGGCGTTCGAAGGAGCACCAGCTGGA
TGCGGTTGCCCTGCAAGGAGAAACAAACATCCAATGCGCCCCGGACCAAG
GGAACCGCTAGAGAAAAACTTATATTTGCTGCTACAGCATACGCAAAAGG
GATTGGCGAGGCGACTACGGCGGAGGATTTGGGAGGGACAAGGGGCCTGG
AAGTGGAATTCAGGCGGCAGCAGGAGAAGGAAATATCTGCATCCGCACTT
GAACTGAAGCCAAGCTGAAGAGAAATTAATGGAGGTGCAATTGCGTGCCA
AGTTAAAGTTCTGCGAATTAGAGTCCCAACTGCGTGCCCAGGGACGAGGA
GAGCAAACAGGCGCAGAGCCTACAGAATGGAGGTCTCCCACAAACTTGCA
CTGAAGCAGACATCTGCGCACTGGCGAGCAGAAATTCAGG
FMO13626.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:37:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| toc-RF | 2525 | CG9660-RF | 1..585 | 178..784 | 2255 | 94.4 | Plus |
| toc-RJ | 4628 | CG9660-RJ | 1362..1732 | 394..784 | 1240 | 92.2 | Plus |
| toc-RI | 3266 | CG9660-RI | 1051..1421 | 394..784 | 1240 | 92.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:37:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3072164..3072540 | 386..9 | 1840 | 99.7 | Minus |
| 2L | 23513712 | 2L | 3071332..3071506 | 784..613 | 655 | 95.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:37:25 has no hits.
FMO13626.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 10:09:56 Download gff for
FMO13626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| toc-RF | 1..592 | 178..790 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:19:21 Download gff for
FMO13626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| toc-RF | 1..592 | 178..790 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:19:21 Download gff for
FMO13626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3071325..3071504 | 615..790 | 95 | <- | Minus |
| 2L | 3071569..3071764 | 396..614 | 89 | <- | Minus |
| 2L | 3072156..3072543 | 2..395 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 10:09:56 Download gff for
FMO13626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3071325..3071504 | 615..790 | 95 | <- | Minus |
| arm_2L | 3071569..3071764 | 396..614 | 89 | <- | Minus |
| arm_2L | 3072156..3072543 | 2..395 | 98 | | Minus |
