FMO13631.5prime Sequence
818 bp (548 high quality bases) assembled on 2013-08-23
> FMO13631.5prime
TCAGTCGACATGTCAGAGCCCGCAGCCCAACAACAGCAGTCCCAGAACGG
CAAGGAGCGCTCCAAGTCCACGGAGGAGAAGGAAGTACCACGCGAACCGG
CGCTGGTCCTCAAAGACATCGATATAAAGACTGAGCTAGAGAGCCTAGTG
AAACTGCTCGATGGCAAGATCTACAAGGAGGAGGAAGTGGCCATGGAGGA
GCTGCATCAGTATCTGATCGAGGACGATGGCTCCTGGGCGCTGGGCGACA
ACTTTCTGATCTTCGTGCAGCGCGTCCTGCGTGACAATCAGGCCTTCTCG
CCGGACACACGGATACACCTGATCCGCACGCTGGCCTATGCGGCGCTCAA
AGATGATGTGATCATCATTCTGCACCAGGATCGAAGGGATCACACACTGA
TGAACTACGCCCAGGACATTAACAAGCAGACGCCCGAGGAGCAGCAGGCC
TGGGCCATGTTTATGTGCAATCTCTTTGAGAACCTGGGTCCCTCCGAATG
GCTGTTGTACATTTCGGAGTGGGAATACAATGGTCAGACCATCTCCAAAC
ATACGAGTGACAACCAAGGTGGCCGTCCACTGCATCCTCTCCAATTGCCC
GCAGCTGAAAAATATTGGCAGCATGATCCTGTACAACATTGCTATAAGGA
AGTGAAGACTGTGTATCGACGATATCGCCGTGGAGCTGGCCATGCCATCT
CAGTCTCAGAGCAGGTCCAACGAGACAATCTCCGCACCTGAGGCTCGTCG
ATCTCGAGTTCGCAGACGTACGATGATCATCAATGATGACGATCAAACAT
CGCGCAGAGCGAGCGCGT
FMO13631.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:37:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6972-RA | 1305 | CG6972-RA | 292..1085 | 10..780 | 3340 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:37:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22703254..22703592 | 124..462 | 1680 | 99.7 | Plus |
| 3R | 32079331 | 3R | 22703652..22703852 | 463..663 | 895 | 98.5 | Plus |
| 3R | 32079331 | 3R | 22702926..22703043 | 10..127 | 575 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:37:41 has no hits.
FMO13631.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 10:10:05 Download gff for
FMO13631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6972-RA | 287..978 | 2..694 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:19:32 Download gff for
FMO13631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6972-RA | 287..978 | 2..694 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:19:32 Download gff for
FMO13631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22703652..22703852 | 463..663 | 98 | -> | Plus |
| 3R | 22703909..22703941 | 664..694 | 93 | == | Plus |
| 3R | 22702921..22703039 | 2..123 | 96 | -> | Plus |
| 3R | 22703254..22703592 | 124..462 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 10:10:05 Download gff for
FMO13631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18528643..18528761 | 2..123 | 96 | -> | Plus |
| arm_3R | 18528976..18529314 | 124..462 | 99 | -> | Plus |
| arm_3R | 18529374..18529574 | 463..663 | 98 | -> | Plus |
| arm_3R | 18529631..18529663 | 664..694 | 93 | == | Plus |
