FMO13633.5prime Sequence
787 bp (704 high quality bases) assembled on 2013-08-23
> FMO13633.5prime
TCAGTCGACATGCTACCGCTCTTTGGGACCATGCCGAATGGCGTCAGTTT
GCCAAATCACCCGAATTTCCTCAACCAATTGGCAGCTGCAATTTCCACGG
CGGCCTCGAGCACATCTGTCGTGGGAAATCCCTCTTCGCCCCCCAAACAG
ATCCAGAATAAGATGGCAAAACAACAACAACAACCACAGGGCAGTGCGCC
CATGGATCTGGAGAATGAGAACGAACACTCTGCGGATGTGAGCTCCTCGA
CGATGCACAAGGAACCCAAGTTGCAGGCCACATCCAACTCGCTCACTCTG
CCCGATTCGACGCAACTATACCTGAATGGCTTGGTGCACACACCACCTGG
ATATCTGTATTTTCCGGCCACCCAAGCGGGTGGTGCTACTGCACCCGGCA
ATCCATCCTCGGCTGCAGGGGGATCCACGCCGGCAGCTTCAGCAAACAGC
ACCGCCAATGCGCAAATGCTCATGGATCCTACGGCCATGATGGCGGCGGC
GATGCAACAAATGCAACAGATGCACTATGCAGCGGCAGCAGCAGCCGGAA
TGACCACAGAAACCCGGAGCTGGACTAGAAGCAACTCTTAATGCGGATGG
CGTTACACCAGCTGGCCTCAAGGAGGTGATCAAGACCAGAACTGCATCCT
GTTTCCACCTAATCCGAACGCACCTCCTCCCACAATATGGAGCGACCACA
GGATGCGACGTGTTTGTGGTGACTGCGGAACATACCGAGAGTGATCGGAG
ATCTTCGATCATGCGCGAGATCACCACCATCGCGCAT
FMO13633.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:37:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10948-RC | 2904 | CG10948-RC | 83..876 | 10..787 | 3480 | 97.2 | Plus |
| CG10948-RB | 2797 | CG10948-RB | 83..876 | 10..787 | 3480 | 97.2 | Plus |
| CG10948-RD | 2870 | CG10948-RD | 53..842 | 14..787 | 3460 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:37:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12849158..12849739 | 596..14 | 2865 | 99.8 | Minus |
| 3L | 28110227 | 3L | 12849004..12849096 | 687..596 | 415 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:37:47 has no hits.
FMO13633.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 10:10:09 Download gff for
FMO13633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10948-RB | 77..760 | 4..687 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:19:35 Download gff for
FMO13633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10948-RB | 77..760 | 4..687 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:19:35 Download gff for
FMO13633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12849004..12849095 | 597..687 | 98 | <- | Minus |
| 3L | 12849158..12849742 | 9..596 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 10:10:09 Download gff for
FMO13633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12842104..12842195 | 597..687 | 98 | <- | Minus |
| arm_3L | 12842258..12842842 | 9..596 | 99 | | Minus |
