FMO13634.5prime Sequence
901 bp (729 high quality bases) assembled on 2013-08-23
> FMO13634.5prime
TCAGTCGACATGGGCGTCAAGGTCAAGGAAACGACACCCCAGCAAATCGA
GGAGCTGCGCGATAGGTTCAATCGCAAATATGCCTCATCCCCTCCGGCAG
CACCTTTCCATCCGACCGATATTGATCGTATTCGCAACGATCATCTGTGG
CTTCAAAGGTTTCTGGAAATGTATGATCTCGACATGGAGACCTCCTTTAA
TTCGCTGTGGGAAACCTGTATCTTGCGTCAGTCAACTGGGGCAAACGATA
TCGATGAGAGCGAGTTGAACCAGGAGTATTTGAAGGAGGGATCCGTGTTT
GTGCACAACACTGATGTGGATGGCAAGCCGTTGTTGGTATTCCGCGTTAA
GATGCACAGTAAGTCCAAGAACCTGGACGAACTGATACGCATCGTGGTGT
ACTGGGTGGAAAGGACTCAGAGGGAGCAGCATCTGACCCAGTTGACCATA
TTCTTCGACATGTCGGGCACGAGTTTGGCCTCCATGGATCTGGAGTTTGT
GAAACGCATTGTGGAGACATTTAAGCAGTTCTATCCCATAGCTTGAACTA
CATTTTGGTATATGAACTGGCTGGGTACTAAATGCTGCTTTTAAGGTCAT
CAAGGCGGTGCTGCCACCCAAAGCGGTTGAGATTTAAAATGATATCGAAA
AGACATCACCAGTACATTACAGGATACTGCCTGCCATCTGGGGTGCGAGA
TACTACGATTTAGCTTTGTGCCGAGCTAAAGTCATTTCAACGTGCTGCAT
GCTGCGATGATGACATCCGACAAAGTCACTTTGTCGATCCGCTCCATGTG
CTCAGAACACATCACAGATGCACACTCATCGAGCATGTGCATCATCCAGA
TTTGTCACTCAATCAGATGCGGAGCCAGATGACACAGTCTTTGCACCTCC
G
FMO13634.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:37:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vap-33B-RE | 2672 | CG33523-RE | 243..972 | 9..723 | 3295 | 97.9 | Plus |
| Vap-33B-RF | 2574 | CG33523-RF | 243..972 | 9..723 | 3295 | 97.9 | Plus |
| Vap-33B-RD | 2574 | CG33523-RD | 243..972 | 9..723 | 3295 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:37:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5924835..5925322 | 99..584 | 2340 | 99.6 | Plus |
| 3L | 28110227 | 3L | 5924104..5924195 | 9..100 | 460 | 100 | Plus |
| 3L | 28110227 | 3L | 5925400..5925469 | 584..651 | 285 | 97.1 | Plus |
Blast to na_te.dros performed 2014-11-28 23:37:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 6624..6686 | 803..864 | 114 | 66.7 | Plus |
FMO13634.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 10:09:49 Download gff for
FMO13634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33523-RD | 52..781 | 9..723 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:19:15 Download gff for
FMO13634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vap-33B-RD | 243..972 | 9..723 | 97 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:19:15 Download gff for
FMO13634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5924104..5924195 | 9..100 | 100 | -> | Plus |
| 3L | 5924837..5925322 | 101..584 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 10:09:49 Download gff for
FMO13634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5917204..5917295 | 9..100 | 100 | -> | Plus |
| arm_3L | 5917937..5918422 | 101..584 | 99 | -> | Plus |
