FMO13637.5prime Sequence
805 bp (417 high quality bases) assembled on 2013-08-23
> FMO13637.5prime
TCAGTCGACATGAAAACTGAGTCCAACGAGAAGTGGGTGGTGTGCCGCGT
TTGCCTGAACAATCCCAGCGAGGGCGAGGAGCTGCTCCACGACATATTCA
GCGAAACGGCAAGCACGCGACTGGACCAAATGCTGCACATTTGCGCAGGC
ATTCCAGTCAGCCTAGATGACAACTTCCCGGACAAGATGTGCAGCAAGTG
CGTGCGCTGCCTGCGGCTCTGCTACAAGTTCCGTCTGACATGCCAGCGAT
CCCATCAGCACATTATGGACATGCTGGACCGGGAGGCCAGCAATGCTAAC
GCCGCCGGCGAAGGGGATTTGCTTAGCATCGCGGAGGACCTTTCGGGGGA
GAGCGTACTGAAGTCGGGGGAGGACTACGCCCAGTTCAGCTGGATGGCCG
GCATGAAAGTTGGAGGGGCGGGGGAGGGATCAGCAACATCAGGTTATCAC
CTATGTCGTGGAGGATGGGTGATACTGATGATACCAATATGTTCGATGTG
CACGATCCCACGCAGCCGGTGCCAAATGAGATCGAGGAGGCTGAAACCTA
TGCTGAATACGAGGAATACGAACTGCCTCACCAACGAAAACTCGCCGGAA
TCGCACAGGAAAAAGGCTCCACCGGCAACAGATGTTGCCACAGAGGAGCC
GCCCGAAGAAGAAATTGCTGAAGACATACTCGACTCTGACGAAGATTATG
ACCCAACTCATGCTAGCCCGAAAATGCGACCGATCGGCAGAGCCAGTTGC
ATACACAAGATAGCCAAAGTGAAACCTTCAAAAGAGTGGCAGAAGCGCGC
ACAGC
FMO13637.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:37:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| trem-RA | 1525 | CG4413-RA | 99..874 | 9..783 | 3365 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:37:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20030436..20031009 | 737..157 | 2265 | 95.7 | Minus |
| 3R | 32079331 | 3R | 20031062..20031211 | 158..9 | 750 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:37:57 has no hits.
FMO13637.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 10:10:17 Download gff for
FMO13637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| trem-RA | 88..883 | 1..794 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:19:41 Download gff for
FMO13637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| trem-RA | 94..889 | 1..794 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:19:41 Download gff for
FMO13637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20030367..20031009 | 157..794 | 95 | <- | Minus |
| 3R | 20031064..20031215 | 1..156 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 10:10:17 Download gff for
FMO13637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15856089..15856731 | 157..794 | 95 | <- | Minus |
| arm_3R | 15856786..15856937 | 1..156 | 97 | | Minus |
