FMO13653.5prime Sequence
398 bp (284 high quality bases) assembled on 2013-08-23
> FMO13653.5prime
TCAGTCGACATGGCATACGTTGCACTGAGCGAAGCTGAAAAAACATATAT
TCTACACGGCGTGGAGGATGACTTTCGTTGCGATGGACGTTCACGACGAG
ATTACCGGCCCATGGACCTGGAAACTGGACTGGTTAGCAATGCCAGTGGA
TCCGCTCGCCTTCGGCTGGCGAACACAGACATACTGGTGGGCGTCAAAAC
CGAGATTGATGTACCCAACCCGCTGACGCCCGAGTTTGGTAAACTGAATT
TTTTGTGAATGGTCTGCTAAGGCCCGCCGGAATTTGAGGACGCGGGGCTC
GAACCTGGCCCAAAACTTATTCCCCCCTGCAACCGCCACAATTCCCTTGG
CCTCAATACGACGTGGGCCCCTTCGGGCACCGGGTGGAAGCGGACTAA
FMO13653.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:38:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rrp42-RA | 981 | CG8395-RA | 71..399 | 10..331 | 1365 | 95.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:38:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16015090..16015279 | 65..254 | 920 | 98.9 | Plus |
| 2R | 25286936 | 2R | 16014978..16015035 | 10..67 | 290 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:38:38 has no hits.
FMO13653.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 10:10:44 Download gff for
FMO13653.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rrp42-RA | 61..399 | 1..331 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:20:07 Download gff for
FMO13653.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rrp42-RA | 61..399 | 1..331 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:20:07 Download gff for
FMO13653.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16014968..16015034 | 1..66 | 94 | -> | Plus |
| 2R | 16015092..16015290 | 67..263 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 10:10:44 Download gff for
FMO13653.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11902473..11902539 | 1..66 | 94 | -> | Plus |
| arm_2R | 11902597..11902795 | 67..263 | 98 | | Plus |
